Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 seq12 89.7 5e-13 >seq1 Length=6229779 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| | ||| || | || | || ||||| ||||| ||||| |||||||| Sbjct 4307432 CCTCCTCTGAGTCTGAGTACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAA 4307373 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | |||| | ||| |||| |||||||| || | ||||| || || || || || ||| Sbjct 4307372 AGGGTTCTTCCATCTTCCAGCTGTTTTCCCGCAAAGATCAACCGCTGTTGATCAGGTGGA 4307313 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| |||||||| || || |||| || || | ||||| |||||||||||| Sbjct 4307312 ATACCTTCCTTATCTTGGATCTTGCTCTTGACAGCATCGATCGTGTCTGAAGACTCGACT 4307253 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | |||| || ||||| || | ||| || || || |||||||| Sbjct 4307252 TCTAATGTAATTGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 4307206 >seq12 Length=1303331 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| | ||| || | ||| | |||||||| ||||| |||||||| || || Sbjct 512519 CCTCCTCTGAGTCTGAGCACCAAGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCTGAA 512460 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | |||| ||| |||| ||||| || || | || | || || || || || || Sbjct 512459 AGGGTTCGTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGTGGG 512400 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| |||||||| || || |||| || || | || ||||| ||||||||| Sbjct 512399 ATACCTTCCTTATCTTGGATCTTGCTCTTGACAGCATCAATCGTATCGGACGACTCGACT 512340 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | ||||| || || || || | || || ||||| |||||||| Sbjct 512339 TCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAGATTTGCAT 512293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002329893840