Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq11 116 5e-21 seq29 105 8e-18 seq35 102 1e-16 seq23 102 1e-16 seq1 100 3e-16 >seq11 Length=1302298 Score = 116 bits (128), Expect = 5e-21 Identities = 227/333 (68%), Gaps = 2/333 (1%) Strand=Plus/Minus Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 ||||||||||| ||||| | || | || ||||| || || | || ||||||||| | | Sbjct 896400 GCATCCTTGTACAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCCTCGAGAATAGCATAC 896341 Query 116611 CATACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669 || | | | | | || | ||||| || || || || |||| ||||||||| | | Sbjct 896340 CAGAGTTTCTGGGCCTTG-ACAGTCTTCTTTGCGCGTCCTTCCTTCTCGTACTTCAAGAA 896282 Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAA 116729 || | || ||||| || || | | || || |||||| | | |||| ||||| Sbjct 896281 CAGCTCATCGAACTCCTCTCCGTAAACTTCGTGTAGGTTTGGTGCTTCAGCTGGGCAGAA 896222 Query 116730 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 116789 ||| | ||| | |||| ||||| || || ||||||| | ||| ||||||||||| || Sbjct 896221 GAGGGGCCAATCACCATTTTCCTCTACACGTCTCATGAACATGTCGGGGATCCAGAGAGC 896162 Query 116790 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 116849 ||||||| || ||| ||| ||||||| | || || || ||| | || | || Sbjct 896161 GTAGAAGAGGTCGCGAGCGCGCACTTCTTCTTTACCGTGGTTCTTACGGAGGTCGAGGAA 896102 Query 116850 GTCCATGATATCCGCGTGCCACGGTTCCAGGTA 116882 || | | |||||||||||| || || | ||| Sbjct 896101 TTCGAAAACATCCGCGTGCCATGGCTCAATGTA 896069 >seq29 Length=171343 Score = 105 bits (116), Expect = 8e-18 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 127537 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 127596 |||||| |||||| ||||||| ||||| |||||| ||||| |||||||| || ||||| Sbjct 54107 ACCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGTCCACGCTT 54166 Query 127597 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 127656 ||| | |||||| || || || || |||||||||||||| ||||| ||| ||||| Sbjct 54167 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 54226 Query 127657 CGC 127659 || Sbjct 54227 TGC 54229 >seq35 Length=121122 Score = 102 bits (112), Expect = 1e-16 Identities = 333/508 (66%), Gaps = 17/508 (3%) Strand=Plus/Plus Query 127537 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 127596 |||||| |||||| ||||||| || || ||||| ||||| |||||||| || ||||| Sbjct 13771 ACCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTT 13830 Query 127597 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 127656 ||| | |||||| || || || || |||||||||||||| ||||| ||| ||||| Sbjct 13831 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 13890 Query 127657 CGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGTATCA-AACCACTTCATCGCCCA 127713 ||| | | || || ||| ||| |||| |||| | | | ||| |||| ||||| Sbjct 13891 CGCTACCAATCGTTCACCAA---AGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCA 13947 Query 127714 CTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC--TTCAAAGA-GTTCCTTCTT 127770 | ||||| || ||| ||| | |||| ||| || | ||||| || | ||| Sbjct 13948 TTCAGCCTTGCGCTTGATGGCTGGCATCGTCTCGATGGCATTGAAAAGACGTGTCCTCTG 14007 Query 127771 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT 127830 | | | || |||||| |||| ||||| || || ||| |||||| | Sbjct 14008 GGCAGTT---TCGCGGATGTATGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTT 14064 Query 127831 TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGC 127890 |||| | | ||| | ||||||| | | || ||| | ||| || || | || Sbjct 14065 TTCAATCATGATCTGGAAGCCGTAGAAGCACCTGGCCTCGGCGACCTGGACTTC-GCTGC 14123 Query 127891 AAAATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA 127949 ||| | | | || ||||| || || ||||||| ||| || || || || | Sbjct 14124 TGAATCGCTCTAGGAGGTTCTCGTTGACGATACCATCGGCGGAAGCGAAGAATGCGAGTA 14183 Query 127950 TATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTCGTCGAGATCCT 128006 | ||||| |||| | || ||| || | ||| |||||||| |||||||| Sbjct 14184 CGTGAGAGATGAAGAAACGTTCGTCCTTGTTGAGCTTGTTCTCCCAGTCGTGGAGATCCT 14243 Query 128007 TTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||||| || | |||||| || ||||| Sbjct 14244 TTGAGAGGTCGATCTCCTCTGCGGTCCA 14271 >seq23 Length=274361 Score = 102 bits (112), Expect = 1e-16 Identities = 333/508 (66%), Gaps = 17/508 (3%) Strand=Plus/Plus Query 127537 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 127596 |||||| |||||| ||||||| || || ||||| ||||| |||||||| || ||||| Sbjct 223602 ACCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTT 223661 Query 127597 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 127656 ||| | |||||| || || || || |||||||||||||| ||||| ||| ||||| Sbjct 223662 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 223721 Query 127657 CGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGTATCA-AACCACTTCATCGCCCA 127713 ||| | | || || ||| ||| |||| |||| | | | ||| |||| ||||| Sbjct 223722 CGCTACCAATCGTTCACCAA---AGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCA 223778 Query 127714 CTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC--TTCAAAGA-GTTCCTTCTT 127770 | ||||| || ||| ||| | |||| ||| || | ||||| || | ||| Sbjct 223779 TTCAGCCTTGCGCTTGATGGCTGGCATCGTCTCGATGGCATTGAAAAGACGTGTCCTCTG 223838 Query 127771 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT 127830 | | | || |||||| |||| ||||| || || ||| |||||| | Sbjct 223839 GGCAGTT---TCGCGGATGTATGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTT 223895 Query 127831 TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGC 127890 |||| | | ||| | ||||||| | | || ||| | ||| || || | || Sbjct 223896 TTCAATCATGATCTGGAAGCCGTAGAAGCACCTGGCCTCGGCGACCTGGACTTC-GCTGC 223954 Query 127891 AAAATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA 127949 ||| | | | || ||||| || || ||||||| ||| || || || || | Sbjct 223955 TGAATCGCTCTAGGAGGTTCTCGTTGACGATACCATCGGCGGAAGCGAAGAATGCGAGTA 224014 Query 127950 TATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTCGTCGAGATCCT 128006 | ||||| |||| | || ||| || | ||| |||||||| |||||||| Sbjct 224015 CGTGAGAGATGAAGAAACGTTCGTCCTTGTTGAGCTTGTTCTCCCAGTCGTGGAGATCCT 224074 Query 128007 TTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||||| || | |||||| || ||||| Sbjct 224075 TTGAGAGGTCGATCTCCTCTGCGGTCCA 224102 >seq1 Length=6229779 Score = 100 bits (110), Expect = 3e-16 Identities = 228/335 (68%), Gaps = 6/335 (2%) Strand=Plus/Minus Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 ||||||||||| ||||| | || | || ||||| || || | || |||||||| | | Sbjct 991764 GCATCCTTGTACAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATAGCATAC 991705 Query 116611 CATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669 |||| | || | | || | ||||| || || || || |||| ||||||||| | | Sbjct 991704 CATAGCTTCTGAGCCTTG-ACAGTCTTCTTTGCCCGTCCTTCCTTCTCGTACTTCAAGAA 991646 Query 116670 GAGGGCCTCAAACTCTTCACC-CACAGCCTC-TGAGAGCCCTGGTGCCTTATCTGGACAG 116727 ||| | || || || || || ||| | || ||| || |||||| | | | || ||| Sbjct 991645 GAGCTCATCGAATTCCTCTCCGTACA-CTTCATGA-AGGTTTGGTGCTTCAGCGGGGCAG 991588 Query 116728 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 116787 || | || ||| | ||| |||||| || || ||||||| | || || |||||||| Sbjct 991587 AACAAAGGCCAATCACCGTTCTCCTCTACTCGTCTCATGAACATATCGGGAATCCAGAGA 991528 Query 116788 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847 || |||| ||||| || || ||||||| | || || || ||||| || | Sbjct 991527 GCGTAGAAAAGATCGCGTGCTCGGACTTCTTCTTTACCGTGGTTCTTGCGCAAGTCGAGG 991468 Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 116882 || || | || |||||| ||||| || || | ||| Sbjct 991467 AACTCGAAGACATCCGCATGCCATGGCTCAATGTA 991433 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608 || || | ||| ||||||||||| || |||||||| || | |||||| |||| | ||| Sbjct 992815 GCTTTCGTTCGAAGGTAGTACATTCCAGTCTTGAGACCTTTCTTCCATCCATAGAAGTGC 992756 Query 115609 ATTGAGGACAACTTG-GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 115667 || || | || ||| | || || || || || | || ||| | | ||| ||||| Sbjct 992755 ATAGAAGT-AAGTTGAGCGAAAGTGGGTGATTGCAAGTGGATGTTGAGAGATTGTGATTG 992697 Query 115668 ATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 115727 |||||||||| ||| | ||||| | ||| ||||| | | |||| |||| ||||| Sbjct 992696 ATCGATGAAGGCTCCTCTGTCCGCTGACATGTCAATGATACTCTTCTGACTGATCTCCCA 992637 Query 115728 CACAGTTCTGTAGAGGTTCTTAATATCATCTGG 115760 || |||| || | ||||| |||||||| Sbjct 992636 TACTGTTCGATAAATAGCTTTAATCTCATCTGG 992604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506018998640