Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq29 107 3e-18 seq35 96.9 6e-15 seq23 96.9 6e-15 >seq29 Length=171343 Score = 107 bits (118), Expect = 3e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 159661 GTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTCTTCACGTGATA 159720 ||||||||||||| ||| || || |||||||| ||||||||||| | || || Sbjct 53751 GTTGGTCTTGCCCGCCAGCGAAATCATCTCCATGAAGTCGAATGGGTTCGCCGAGTTGTA 53810 Query 159721 GCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCGATGTAGCTACA 159780 | ||||| | || || || | || | |||||||| ||||| |||||||| || Sbjct 53811 GTGCTTCTCATTACCCAGTGCTACTAGTAGTCTGTCTGCTACAAACTCGATGTACTGGCA 53870 Query 159781 CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTT 159840 ||||||||| ||| || || | || | |||||||| || || || || |||||||| Sbjct 53871 CATCTGCTCTGCGTTCATGCCGATGAGGCGGACGGGGAGGGCATCGGAGAGGAACTCCTT 53930 Query 159841 CTCAATCTCGACCGCTT 159857 || |||||||| |||| Sbjct 53931 TTCGATCTCGACGGCTT 53947 Score = 107 bits (118), Expect = 3e-18 Identities = 337/511 (66%), Gaps = 22/511 (4%) Strand=Plus/Plus Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 ||||| || || |||||| ||| ||||| | | | || || ||||||| |||||| Sbjct 54108 CCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGTCCACGCTTC 54167 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 |||||||| || ||||| || |||| ||| || ||||| ||||| || || || || Sbjct 54168 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAT 54227 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123 || || | ||||||||||| | | | |||| | |||| | | ||||||||| Sbjct 54228 GCTACCAATCTCTCACCAAAGCACGACTGCTTGTCTGAGATCCAAGTCATTGCCCATTCA 54287 Query 160124 GCCTT---CTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA-ATCTGTCC----T 160175 ||||| ||| |||| ||||| ||||| ||| || || | | ||| | | Sbjct 54288 GCCTTGCGCTT---GATGGCAGGCATCGTCTCGATGGCATTGAATAGACGTGTTCGCTGT 54344 Query 160176 GCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACAT 160235 || ||| | ||| ||| | || || ||||| | ||||||||| | | Sbjct 54345 GCGGTTTCGC-----GGATGTAGGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGT 54399 Query 160236 TTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC-TGCACCTC-CTG 160293 |||| || ||||| ||| |||||| | | |||| | | || || || || ||| Sbjct 54400 TTTCAATCATGATCTGGAAGCCGTAGAAGCACCTGGCCT-CTGCGACTTGGACTTCGCTG 54458 Query 160294 TGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAA 160353 |||| | || || || | || || | |||||||| | || ||||| || | Sbjct 54459 -CTGAATCGTTCTAGGAGGTTCTCGTTGACGATACCGTCGGCAGAGGCGAAGAATGCGAG 54517 Query 160354 CACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGT 160412 |||||||||||||| | | ||||| |||||||| | || ||||||| ||| || || Sbjct 54518 TACGTGAGAGATGAAGTAGCGTTCGTCCTTGTTGAGCTTGTTCTCCCAGTCGTG-CAGGT 54576 Query 160413 CTTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443 | | | | |||| ||| || ||| |||| Sbjct 54577 CCTTTGAGAGGTCAATCTCCTCTGCGGTCCA 54607 >seq35 Length=121122 Score = 96.9 bits (106), Expect = 6e-15 Identities = 306/468 (65%), Gaps = 16/468 (3%) Strand=Plus/Plus Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 ||||| || || |||||| ||||||||| | | || || ||||||| |||||| Sbjct 13772 CCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTC 13831 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 |||||||| || ||||| || |||| ||| || ||||| ||||| || || || ||| Sbjct 13832 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAC 13891 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123 || || | | |||||||| | | | |||| | |||| | | ||||||||| Sbjct 13892 GCTACCAATCGTTCACCAAAGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCATTCA 13951 Query 160124 GCCTT---CTTTGCGATGCACGGCATGCGCTCGACGGCGTT-AAACAATCTGTCCTGCTC 160179 ||||| ||| |||| ||||| ||||| ||| || ||| | |||||| Sbjct 13952 GCCTTGCGCTT---GATGGCTGGCATCGTCTCGATGGCATTGAAAAGACGTGTCCT---- 14004 Query 160180 CTTCACA---TCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATT 160236 || || || ||| ||| | || || ||||| | ||||||||| | || Sbjct 14005 CTGGGCAGTTTCGCGGATGTATGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTT 14064 Query 160237 TTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTC-CTGTG 160295 ||| || ||||| ||| |||||| | | ||||| ||| || || ||| Sbjct 14065 TTCAATCATGATCTGGAAGCCGTAGAAGCACCTGGCCTCGGCGACCTGGACTTCGCTG-C 14123 Query 160296 TGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACA 160355 |||| | | || || | || || | || ||||||| || ||||| || | | Sbjct 14124 TGAATCGCTCTAGGAGGTTCTCGTTGACGATACCATCGGCGGAAGCGAAGAATGCGAGTA 14183 Query 160356 CGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT 160403 ||||||||||||| | ||||| |||||||| | || ||||||| Sbjct 14184 CGTGAGAGATGAAGAAACGTTCGTCCTTGTTGAGCTTGTTCTCCCAGT 14231 >seq23 Length=274361 Score = 96.9 bits (106), Expect = 6e-15 Identities = 306/468 (65%), Gaps = 16/468 (3%) Strand=Plus/Plus Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 ||||| || || |||||| ||||||||| | | || || ||||||| |||||| Sbjct 223603 CCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTC 223662 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 |||||||| || ||||| || |||| ||| || ||||| ||||| || || || ||| Sbjct 223663 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAC 223722 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123 || || | | |||||||| | | | |||| | |||| | | ||||||||| Sbjct 223723 GCTACCAATCGTTCACCAAAGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCATTCA 223782 Query 160124 GCCTT---CTTTGCGATGCACGGCATGCGCTCGACGGCGTT-AAACAATCTGTCCTGCTC 160179 ||||| ||| |||| ||||| ||||| ||| || ||| | |||||| Sbjct 223783 GCCTTGCGCTT---GATGGCTGGCATCGTCTCGATGGCATTGAAAAGACGTGTCCT---- 223835 Query 160180 CTTCACA---TCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATT 160236 || || || ||| ||| | || || ||||| | ||||||||| | || Sbjct 223836 CTGGGCAGTTTCGCGGATGTATGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTT 223895 Query 160237 TTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTC-CTGTG 160295 ||| || ||||| ||| |||||| | | ||||| ||| || || ||| Sbjct 223896 TTCAATCATGATCTGGAAGCCGTAGAAGCACCTGGCCTCGGCGACCTGGACTTCGCTG-C 223954 Query 160296 TGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACA 160355 |||| | | || || | || || | || ||||||| || ||||| || | | Sbjct 223955 TGAATCGCTCTAGGAGGTTCTCGTTGACGATACCATCGGCGGAAGCGAAGAATGCGAGTA 224014 Query 160356 CGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT 160403 ||||||||||||| | ||||| |||||||| | || ||||||| Sbjct 224015 CGTGAGAGATGAAGAAACGTTCGTCCTTGTTGAGCTTGTTCTCCCAGT 224062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153669326240