Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 100 7e-16 seq7 89.7 1e-12 seq5 87.8 4e-12 >seq1 Length=6229779 Score = 100 bits (110), Expect = 7e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || || | |||||| || |||||| |||| ||| || || | | || ||| Sbjct 4307423 AGTCTGAGTACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAAAGGGTTCTT 4307364 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||||||| ||||| || ||||| | ||||| || || || ||| ||||| Sbjct 4307363 CCATCTTCCAGCTGTTTTCCCGCAAAGATCAACCGCTGTTGATCAGGTGGAATACCTTCC 4307304 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || ||||| ||| || | |||| ||||||| | || || || || || Sbjct 4307303 TTATCTTGGATCTTGCTCTTGACAGCATCGATCGTGTCTGAAGACTCGACTTCTAATGTA 4307244 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || | ||| || || || ||||| Sbjct 4307243 ATTGTCTTGCCAGTCAAAGTCTTGACGAAGATTTG 4307209 >seq7 Length=1728130 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || ||||||||||| |||| ||||||||| | | |||| |||||| || |||||| Sbjct 1697615 TGCAGGGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTCCGTCCATCCTCGAGCTGC 1697674 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || || ||||||||||||||||| || || || Sbjct 1697675 TTGCCTGCGAAGATGAGACGCTGTTGATCGGG 1697706 >seq5 Length=2077020 Score = 87.8 bits (96), Expect = 4e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | || || | ||| | || |||||||| |||| |||||||| | ||| || Sbjct 1583331 TCGAAGACGGAGCACCAAGTGCAAGGTAGACTCCTTCTGGATATTGTAGTCTGACAAGGT 1583272 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | |||||| || ||||| || || ||||||||||||||||| ||||| || Sbjct 1583271 TCGTCCATCCTCGAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGGTCGGG 1583221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919273840318