Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq29 228 8e-55 seq35 214 2e-50 seq23 214 2e-50 seq17 93.3 4e-14 seq12 91.5 1e-13 seq1 89.7 5e-13 seq7 84.2 2e-11 seq5 84.2 2e-11 >seq29 Length=171343 Score = 228 bits (252), Expect = 8e-55 Identities = 364/519 (70%), Gaps = 5/519 (1%) Strand=Plus/Plus Query 132916 CCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTT 132975 ||||| || | | | ||||| || ||| ||| || | || |||||||| || || || Sbjct 54108 CCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGTCCACGCTTC 54167 Query 132976 TTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAA 133035 |||||||| || |||||||||||| || || ||||||| |||||| || || ||||| Sbjct 54168 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAT 54227 Query 133036 GCCACCAGGCGCTCGCCGAA-CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTC 133094 || |||| | ||| || || | | || ||| || | |||||| || |||||||| Sbjct 54228 GCTACCAATCTCTCACCAAAGCACGACTGCTTGTCT-GAGATCCAAGTCATTGCCCATTC 54286 Query 133095 GGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTC 133154 ||||| |||| | |||||||| |||||||| || || | ||| | || | | Sbjct 54287 AGCCTTGCGCTTGATGGCAGGCATCGTCTCGATGGCATTGAATAGACGTGTTCGCTGTGC 54346 Query 133155 CGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCAT 133214 | || | |||||| ||||||||| || || | ||| | ||| | ||| || || Sbjct 54347 GGTTTCGCGGATGTAGGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTCAAT 54406 Query 133215 GGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACG 133274 ||| || |||||||| ||||||| ||||| | || || ||||| ||| || Sbjct 54407 CATGATCTGGAAGCCGTAGAAGCACCTGGCCTCTGCGACTTGGACTTCGCTGCTGAATCG 54466 Query 133275 CTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTT 133334 || | || || ||||||||||| |||||| | |||||| || || || ||||| Sbjct 54467 TTCTAGGAGGTTCTCGTTGACGATACCGTCGGCAGAGGCGAAGAATGCGAGTACGTGAGA 54526 Query 133335 GATGAAATGGCGCTCG---TTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAG 133391 |||||| | ||| ||| |||| | | | |||||||||| || |||||| || || Sbjct 54527 GATGAAGTAGCGTTCGTCCTTGTTGAGCTTGTTCTCCCAGTCGTGCAGGTCCTTTGAGAG 54586 Query 133392 GTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTT 133430 ||| | |||||| ||||||| || |||||||| ||||| Sbjct 54587 GTCAATCTCCTCTGCGGTCCAGAAGGACGCCTCTGCTTT 54625 >seq35 Length=121122 Score = 214 bits (236), Expect = 2e-50 Identities = 363/521 (70%), Gaps = 9/521 (2%) Strand=Plus/Plus Query 132916 CCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTT 132975 ||||| || | | | ||||| |||||| ||| || | || |||||||| || || || Sbjct 13772 CCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTC 13831 Query 132976 TTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAA 133035 |||||||| || |||||||||||| || || ||||||| |||||| || || ||||| Sbjct 13832 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAC 13891 Query 133036 GCCACCAGGCGCTCGCCGAA-CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTC 133094 || |||| || || || || | | || ||| || | |||||| || |||||||| Sbjct 13892 GCTACCAATCGTTCACCAAAGCACGACTGCTTGTCT-GAGATCCATGTCATTGCCCATTC 13950 Query 133095 GGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTC 133154 ||||| |||| | |||||||| |||||||| || || | ||| | |||| Sbjct 13951 AGCCTTGCGCTTGATGGCTGGCATCGTCTCGATGGCATTGAAAAGACG--TGTCCTCTGG 14008 Query 133155 CGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCC 133212 || ||| | ||| || ||||||||| || || | ||| | ||| | ||| || Sbjct 14009 GCAGTTTCGCGGATGTATGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTCA 14068 Query 133213 ATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA 133272 || ||| || |||||||| ||||||| |||||| | ||||| ||||| ||| Sbjct 14069 ATCATGATCTGGAAGCCGTAGAAGCACCTGGCCTCGGCGACCTGGACTTCGCTGCTGAAT 14128 Query 133273 CGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGC 133332 ||||| | || || ||||||||||| || ||| || ||||| || || || ||||| Sbjct 14129 CGCTCTAGGAGGTTCTCGTTGACGATACCATCGGCGGAAGCGAAGAATGCGAGTACGTGA 14188 Query 133333 TTGATGAAATGGCGCTCG---TTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGAC 133389 |||||| || ||| |||| | | | |||||||||| | ||||| || Sbjct 14189 GAGATGAAGAAACGTTCGTCCTTGTTGAGCTTGTTCTCCCAGTCGTGGAGATCCTTTGAG 14248 Query 133390 AGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTT 133430 ||||| | |||||| ||||||| || || ||||| ||||| Sbjct 14249 AGGTCGATCTCCTCTGCGGTCCAGAAGGAAGCCTCTGCTTT 14289 >seq23 Length=274361 Score = 214 bits (236), Expect = 2e-50 Identities = 363/521 (70%), Gaps = 9/521 (2%) Strand=Plus/Plus Query 132916 CCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTT 132975 ||||| || | | | ||||| |||||| ||| || | || |||||||| || || || Sbjct 223603 CCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTC 223662 Query 132976 TTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAA 133035 |||||||| || |||||||||||| || || ||||||| |||||| || || ||||| Sbjct 223663 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAC 223722 Query 133036 GCCACCAGGCGCTCGCCGAA-CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTC 133094 || |||| || || || || | | || ||| || | |||||| || |||||||| Sbjct 223723 GCTACCAATCGTTCACCAAAGCACGACTGCTTGTCT-GAGATCCATGTCATTGCCCATTC 223781 Query 133095 GGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTC 133154 ||||| |||| | |||||||| |||||||| || || | ||| | |||| Sbjct 223782 AGCCTTGCGCTTGATGGCTGGCATCGTCTCGATGGCATTGAAAAGACG--TGTCCTCTGG 223839 Query 133155 CGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCC 133212 || ||| | ||| || ||||||||| || || | ||| | ||| | ||| || Sbjct 223840 GCAGTTTCGCGGATGTATGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTCA 223899 Query 133213 ATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA 133272 || ||| || |||||||| ||||||| |||||| | ||||| ||||| ||| Sbjct 223900 ATCATGATCTGGAAGCCGTAGAAGCACCTGGCCTCGGCGACCTGGACTTCGCTGCTGAAT 223959 Query 133273 CGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGC 133332 ||||| | || || ||||||||||| || ||| || ||||| || || || ||||| Sbjct 223960 CGCTCTAGGAGGTTCTCGTTGACGATACCATCGGCGGAAGCGAAGAATGCGAGTACGTGA 224019 Query 133333 TTGATGAAATGGCGCTCG---TTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGAC 133389 |||||| || ||| |||| | | | |||||||||| | ||||| || Sbjct 224020 GAGATGAAGAAACGTTCGTCCTTGTTGAGCTTGTTCTCCCAGTCGTGGAGATCCTTTGAG 224079 Query 133390 AGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTT 133430 ||||| | |||||| ||||||| || || ||||| ||||| Sbjct 224080 AGGTCGATCTCCTCTGCGGTCCAGAAGGAAGCCTCTGCTTT 224120 >seq17 Length=645479 Score = 93.3 bits (102), Expect = 4e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 38347 GAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCA 38406 |||| || ||||||||||||| ||||| | ||| || |||||||| || || | || | Sbjct 176752 GAATCCCTCCCGACCAACAGCGTCTCATCTTCGCTGGTAAACAGCTCGAGGATGGACGAA 176693 Query 38407 CCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAG 38466 ||||| ||||||||||||||| ||||| | || |||| ||||| || ||| | ||| Sbjct 176692 CCCTCTCCGACTACAACATCCAGAAGGAGTCTACCTTGCACTTGGTACTCCGTCTACGAG 176633 Query 38467 GCGG 38470 | || Sbjct 176632 GTGG 176629 >seq12 Length=1303331 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || || || ||||| || | || |||||| | || Sbjct 512293 ATGCAAATCTTTGTCAAGACATTGACAGGAAAGACCATTACTTTGGAAGTCGAGTCGTCC 512352 Query 38304 GACA-GCGTGCAAACGCT-TAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 || | | || | ||| | |||| || |||| || || || || || || | || Sbjct 512353 GATACGATTG---ATGCTGTCAAGAGCAAGATCCAAGATAAGGAAGGTATCCCACCTGAT 512409 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||| | ||||| | ||||| ||||||||||| || | || ||||| |||||| Sbjct 512410 CAACAGAGACTCATCTTTGCGGGTAAACAGCTGGAAGATGGACGAACCCTTTCAGACTAC 512469 Query 38421 AACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCT 38455 || ||||| ||||| ||| |||||||| |||||||| Sbjct 512470 AATATCCAGAAGGAGAGC-ACGCTGCACTTGGTGCT 512504 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 |||||| || ||||| | ||| ||||||||||| || |||| || ||||||| |||||| Sbjct 511897 CCAACAACGTCTCATCTTCGCCGGCAAACAGCTCGAGGACGGCCGAACCCTCAGCGACTA 511956 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || || ||||| | || |||| ||||| || ||| | ||||| || Sbjct 511957 CAATATTCAGAAGGAGTCTACCTTGCACTTGGTCCTTCGTCTAAGAGGAGG 512007 >seq1 Length=6229779 Score = 89.7 bits (98), Expect = 5e-13 Identities = 81/101 (80%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 ||||||| || |||||||| ||||| | ||| ||||| ||||| || || | || |||| Sbjct 3066952 TCCCGCCCGATCAACAGCGTCTCATCTTCGCAGGCAAGCAGCTCGAGGATGGACGAACCC 3067011 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTG 38450 || ||||||||||||||| |||||| | || |||||| || Sbjct 3067012 TCTCCGACTACAACATCCAGAAGGAATCTACCCTGCATGTG 3067052 Score = 82.4 bits (90), Expect = 8e-11 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || ||||| || || || | || |||||| | | Sbjct 4307206 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACAATTACATTAGAAGTCGAGTCTTCA 4307265 Query 38304 GACAGCGTGCAAACGCT-TAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| || | | ||| | |||| || |||| || || || || ||||| | || | Sbjct 4307266 GACA-CGATCGAT-GCTGTCAAGAGCAAGATCCAAGATAAGGAAGGTATTCCACCTGATC 4307323 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||||||| | || | ||||| ||||||||||| || | | ||||| || || | Sbjct 4307324 AACAGCGGTTGATCTTTGCGGGAAAACAGCTGGAAGATGGAAGAACCCTTTCGGATTATA 4307383 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCT 38455 ||||||| ||||| ||| ||||| || ||||| || Sbjct 4307384 ACATCCAGAAGGAGAGC-ACGCTCCACTTGGTACT 4307417 >seq7 Length=1728130 Score = 84.2 bits (92), Expect = 2e-11 Identities = 80/101 (79%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 ||||||| || |||||||| ||||| | ||| ||||| ||||| || || | || |||| Sbjct 1697711 TCCCGCCCGATCAACAGCGTCTCATCTTCGCAGGCAAGCAGCTCGAGGATGGACGGACCC 1697652 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTG 38450 || |||||||||||||| ||||| |||| |||||| || Sbjct 1697651 TCTCAGACTACAACATCCAGAAGGAGTCGACCCTGCATGTG 1697611 >seq5 Length=2077020 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 38347 GAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCA 38406 |||| || ||||||||||||| ||||| | ||| ||||||||||| || || | || | Sbjct 1583213 GAATCCCACCCGACCAACAGCGTCTCATCTTCGCTGGCAAACAGCTCGAGGATGGACGAA 1583272 Query 38407 CCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAG 38466 || | |||||||| ||||| ||||| | || |||| |||||||| ||| | ||| Sbjct 1583273 CCTTGTCAGACTACAATATCCAGAAGGAGTCTACCTTGCACTTGGTGCTCCGTCTTCGAG 1583332 Query 38467 GCGG 38470 | || Sbjct 1583333 GTGG 1583336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171837167360