Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 131 7e-25 seq12 109 2e-18 seq2 84.2 9e-11 >seq1 Length=6229779 Score = 131 bits (144), Expect = 7e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||||| || || ||||| | || || || || || Sbjct 4307206 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACAATTACATTAGAAGTCGAGTCTTCA 4307265 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || ||| | || || || |||||||||||||| ||||| ||||||||| Sbjct 4307266 GACACGATCGATGCTGTCAAGAGCAAGATCCAAGATAAGGAAGGTATTCCACCTGATCAA 4307325 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || || || | || ||||| || |||||||||||||| | |||||||||| Sbjct 4307326 CAGCGGTTGATCTTTGCGGGAAAACAGCTGGAAGATGGAAGAACCCTTTCGGATTATAAC 4307385 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| || || ||||| ||| | ||||| |||||| Sbjct 4307386 ATCCAGAAGGAGAGCACGCTCCACTTGGTACTCAGACTCAGAGGA 4307430 >seq12 Length=1303331 Score = 109 bits (120), Expect = 2e-18 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || ||| |||| || || || |||||| | || || || || || Sbjct 512293 ATGCAAATCTTTGTCAAGACATTGACAGGAAAGACCATTACTTTGGAAGTCGAGTCGTCC 512352 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| ||| | || || || |||||||||||||| || || ||||||||| Sbjct 512353 GATACGATTGATGCTGTCAAGAGCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCAA 512412 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || ||||| || ||||||||| |||| | | || || ||| Sbjct 512413 CAGAGACTCATCTTTGCGGGTAAACAGCTGGAAGATGGACGAACCCTTTCAGACTACAAT 512472 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| || || ||||| || | ||||| |||||| Sbjct 512473 ATCCAGAAGGAGAGCACGCTGCACTTGGTGCTCAGACTCAGAGGA 512517 >seq2 Length=3751008 Score = 84.2 bits (92), Expect = 9e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 248487 ACATGGACAAAAAGGAACAGTTGGTATTACTTTGCCACAAAGAGATATGCCTTTCACATC 248546 ||| || || ||||| || ||||||| || | | |||| ||||||||||||| | Sbjct 3254702 ACACGGTCAGAAAGGTACTATTGGTATCACCTATCGACAAGAAGATATGCCTTTCTCTGT 3254643 Query 248547 AGAAGGTATGACTCCAGATTTAATTTTCAATCCACATGGTATGCCTACACGTATGACTAT 248606 |||||||| ||||| ||| | || | ||||| |||| ||| ||| | |||||||| || Sbjct 3254642 CGAAGGTATCACTCCTGATATCATCATTAATCCCCATGCTATTCCTTCGCGTATGACAAT 3254583 Query 248607 GGGACAATT 248615 ||||| || Sbjct 3254582 CGGACATTT 3254574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975714501660632