Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-18 seq16 87.8 1e-11 >seq1 Length=6229779 Score = 111 bits (122), Expect = 1e-18 Identities = 157/217 (72%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 635425 CAAAGAAGG-ATATAAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCG 635483 ||||||| | | | || |||||||| || | ||||| ||||| || || || || || | Sbjct 5369790 CAAAGAATGCAAAGAATTGTACCCTGATACTCACAGAAGGAGACTCTGCCAAGACTTTTG 5369849 Query 635484 CTATGTCTGGTCTTAATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAA 635543 |||| || ||||| || | |||||||| |||||| ||||||||||| ||||||| Sbjct 5369850 CTATTTCAGGTCTGGCGGTCGTAGGAAGAGACACTTATGGTGTTTTCCCACTGAGAGGAA 5369909 Query 635544 AACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTGCTGATAATGAGGAAATTACAG 635603 || | | |||||||| ||||||||| ||| | | | ||||||| ||| ||| ||| Sbjct 5369910 AATTGCTCAATGTTAGAGATGCTAGTGGAAAACAGTTAACGGATAATGTGGAGATT-CAG 5369968 Query 635604 CA-ATCaaaaaaaTTGTTGGACTTGAACAAGGAAAAG 635639 || | || || ||| | ||| | | || || |||| Sbjct 5369969 CACTTGAAGAAGATTCTGGGATTGCAGCATGGGAAAG 5370005 >seq16 Length=893829 Score = 87.8 bits (96), Expect = 1e-11 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 668842 TGAAAGATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGA 668901 || |||| ||| ||||||||||| ||| | | |||||| ||||||||||||| || || Sbjct 726073 TGCAAGACTAAAGGGTAAAGAAGGCCGTTTACGTGGAAATCTGATGGGAAAACGAGTGGA 726132 Query 668902 TATGTCTGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGT 668961 | | || || |||||||| |||||| |||||| ||| | | ||| | |||| || || Sbjct 726133 TTTCTCAGCTCGTACAGTCATTACTGGTGATCCTAATCTGGATCTGGACCAAGTCGGAGT 726192 Query 668962 TCC 668964 || Sbjct 726193 ACC 726195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780814758012724