Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq6 352 4e-92 seq15 322 6e-83 seq1 145 1e-29 seq12 143 3e-29 seq2 98.7 1e-15 seq10 82.4 1e-10 >seq6 Length=1874668 Score = 352 bits (390), Expect = 4e-92 Identities = 599/866 (69%), Gaps = 9/866 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||| || || || || | || ||||| ||||| |||||||||||||| Sbjct 1320565 TCACCAGTCAGGATAGCAGCCTGAACGGCAGCACCGTAGGCGACAGCCTCATCGGGGTTG 1320506 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || | || || | | | |||| | | ||| Sbjct 1320505 ATGGACTTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGAGACGAGCTTCTGAACTCTTGGG 1320446 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || ||||||||||| | ||||| || | || || || |||||||| ||| Sbjct 1320445 ATACGGGTGGATCCACCGACGAGGACGATCTCGTGTACGGAAGACTTGTCGATCTTGGAG 1320386 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCAT---ACATTTACGGAACAAGTCCATACACAGT 7246 || || || || ||||| || ||||| | || ||||| | ||| || || Sbjct 1320385 TCGCGGAGAACCTTCTCGACTGGGTCCATGGTAGAT---CGGAAGAGATCCTGGCAGAGC 1320329 Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| || | |||||||| ||||| || ||||| || | || ||||| | || || Sbjct 1320328 TCCTCGAATCTAGCACGGGTGATGGAGGTGTAGAAGTCGATACCTTCGTAGAGAGAGTCG 1320269 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 ||||| ||||| || || || | || || | ||||||||||| ||||| || || ||| Sbjct 1320268 ATTTCGATGGTGGTCTGAGCGGCGGAGGAAAGAGTTCGCTTTGCTCGCTCGCATGCGGTT 1320209 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | ||| || || ||||| | ||| |||| | ||| ||||| | || || || ||| Sbjct 1320208 CGCAGACGTCGGAGAGCACGAGCGTTTCCGGCGAGATCCTTCTTGTTCTTGCGCTTGAAC 1320149 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 || | || |||||| | ||||| ||||| || || || |||||||| || || Sbjct 1320148 TCCTGAGTGAAGTGGTTGACTAGTCTGTTGTCGAAGTCCTCTCCTCCCAAGTGGGTGTCA 1320089 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || ||||| || |||||||| |||||||| | || ||| | | | || ||||| || Sbjct 1320088 CCGGCGGTAGCCTTGACTTCGAAGATACCCTCCTCGATGGTAAGGAGAGATACATCGAAA 1320029 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG---TCGTCTTTGTTCTTATCG 7603 ||||||||||| || || || ||||| |||||| | ||| || | ||||| ||| Sbjct 1320028 GTACCACCACCGAGATCGAAGATGAGGACGTTCTTCTCGCCAGCGGCGCCCTTCTTGTCG 1319969 Query 7604 AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCA 7663 |||||||| |||||||| || || || || || || |||||||| ||| | || ||| Sbjct 1319968 AGACCGTAAGCGATAGCAGCGGCGGTAGGCTCGTTGATAATACGGAGAACCTGCATGCCG 1319909 Query 7664 GCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACC 7723 || || | ||||| || || ||||| || ||||| || || |||||||| ||||| Sbjct 1319908 GCGATCTGACCAGCATCCTTGGTAGCTTGACGCTGCGAGTCATTGAAGTAGGCAGGGACA 1319849 Query 7724 GTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTG 7783 || | ||| || | | |||| | |||||| | | || ||| | ||| ||| ||| Sbjct 1319848 GTGATGACGGCCTGCTTGACGTCTCCACCGAGGAAAGCCTCAGCGGTCTCTCGCATCTTG 1319789 Query 7784 GTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCA 7843 || ||||| || || |||||||||| | || ||| | || || || | || Sbjct 1319788 AGGAGGACCATGGAGGAGATCTCTTCAGGTGTGAAAGTCTTCTTCTCGCCCTTGTACTCG 1319729 Query 7844 ACTTCAATCATGGGTTTATCCGCAGC 7869 || ||||| | ||| || || |||| Sbjct 1319728 ACCTCAATGACGGGCTTGTCACCAGC 1319703 >seq15 Length=984733 Score = 322 bits (356), Expect = 6e-83 Identities = 592/866 (68%), Gaps = 9/866 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||| || || || || | || ||||| || || ||||| |||||||| Sbjct 438195 TCACCGGTCAGGATAGCAGCCTGAACAGCGGCACCGTAGGCTACAGCCTCGTCGGGGTTG 438136 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | ||| || | || || ||||| || | || || | | | |||| | | ||| Sbjct 438135 ATAGATTTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGAAACGAGCTTCTGAACTCTTGGG 438076 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || ||||||||||| | || || || | || ||||| || ||||| ||| Sbjct 438075 ATACGGGTGGATCCACCGACGAGGACAATCTCGTGTACGGAGGATTTGTCAATCTTGGAG 438016 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCAT---ACATTTACGGAACAAGTCCATACACAGT 7246 || || || || ||||| || ||||| | || | ||| | |||| || || Sbjct 438015 TCGCGGAGGACCTTCTCGACTGGGTCCATGGTAGATCT---GAAGAGGTCCTGGCAGAGC 437959 Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 || || || | |||||||| ||||| || ||||| || | || ||| | | || ||| Sbjct 437958 TCTTCGAATCTGGCACGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGAGAGTCA 437899 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 || || ||||| || || || | || || | ||||||||||| ||||| || || ||| Sbjct 437898 ATCTCGATGGTGGTCTGAGCAGCGGAGGAAAGGGTTCGCTTTGCTCGCTCGCATGCGGTT 437839 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | ||| || || ||||| | || || | || || ||||| | || ||||| ||| Sbjct 437838 CGCAGACGTCGGAGTGCACGGGCATTGCCAGCAAGGTCCTTCTTGTTCTTGCGTTTGAAC 437779 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 || | || |||||| | ||||| ||||| || || || |||||||| || || Sbjct 437778 TCCTGAGTGAAGTGGTTGACTAGTCTGTTGTCGAAGTCCTCTCCTCCCAAGTGGGTGTCA 437719 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || ||||| || |||||||| |||||||| | || ||| | | | || ||||| || Sbjct 437718 CCGGCGGTAGCCTTGACTTCGAAGATACCCTCCTCGATGGTAAGGAGAGAGACATCGAAA 437659 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC---GTCTTTGTTCTTATCG 7603 ||||||||||| || || || ||||| |||||| | ||| | | ||||| ||| Sbjct 437658 GTACCACCACCGAGATCGAAGATGAGGACGTTCTTCTCGCCAGAAGCGCCCTTCTTGTCG 437599 Query 7604 AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCA 7663 |||||||| |||||||| || || || || || || || || || ||| | || ||| Sbjct 437598 AGACCGTAAGCGATAGCAGCGGCGGTAGGCTCGTTGATGATTCGGAGAACCTGCATGCCG 437539 Query 7664 GCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACC 7723 || || | ||||| || || ||||| || || || ||||| |||||||| ||||| Sbjct 437538 GCGATCTGACCAGCATCCTTGGTAGCTTGACGCTGAGAGTCGTTGAAGTAGGCAGGGACA 437479 Query 7724 GTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTG 7783 || | ||| || | | |||| | |||||| | | || ||| | ||| ||| ||| Sbjct 437478 GTGATGACGGCCTGCTTGACGTCTCCACCGAGGAAGGCCTCAGCGGTCTCTCGCATCTTG 437419 Query 7784 GTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCA 7843 || ||||| ||||| || ||||||| | || ||| | || || || | || Sbjct 437418 AGGAGGACCATGGATGAGATTTCTTCAGGGGTGAAGGTCTTCTTCTCGCCCTTGTACTCG 437359 Query 7844 ACTTCAATCATGGGTTTATCCGCAGC 7869 |||||||| | ||| || || |||| Sbjct 437358 ACTTCAATAACGGGCTTGTCACCAGC 437333 >seq1 Length=6229779 Score = 145 bits (160), Expect = 1e-29 Identities = 291/424 (69%), Gaps = 13/424 (3%) Strand=Plus/Minus Query 7331 GAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGG 7390 ||||| | ||||||||||| ||||| || || | || | |||||| || ||||| | Sbjct 4732066 GAAGAAAGGGTTCGCTTTGCACGCTCGCATGCTGATCTCAGACGACGCAGAGCACGGGCA 4732007 Query 7391 TTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAG 7449 | || || || | ||| || || | || ||||| | |||||| |||| | || Sbjct 4732006 TCTCCCTCGATGTCCTGCTTGTGCTTCCTCTTGAACTCAGCCTTGAAGTGCTCGA-GAAG 4731948 Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 ||||||||| || ||||||||||| || || || ||||| || ||||| | || Sbjct 4731947 GGCGTTATCGAAATCCTCTCCACCCAAGTGGGTGTCACCAGCGGTGGCCTTGACGGCGAA 4731888 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 || |||||| ||| | | | || ||||| || ||||||||||| || || || || Sbjct 4731887 GACACCTCCAGTGATGGTAAGGAGAGATACATCGAAAGTACCACCACCGAGATCGAAGAT 4731828 Query 7570 GAGTAC-GTTCGTATCGTC--GTCTTTGTTCTT------ATCGAGACCGTACGCGATAGC 7620 ||| || || || | || ||| |||| || |||||||||||| ||||| || Sbjct 4731827 GAGAACAGTGCGCTCCTTCTTGTCCTTGTCGTTGGCGGCATCGAGACCGTAAGCGATGGC 4731768 Query 7621 CGCCGCCGTTGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCAT 7679 || || || || || || || |||| || |||| | || ||||| || || | |||| Sbjct 4731767 AGCGGCGGTAGGCTCGTTGATGATACGGAGGACA-TCGAGACCAGCGATGGTACCGGCAT 4731709 Query 7680 CTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCG 7739 | || || | | | || || || ||||| ||||| || || || || || || || | | Sbjct 4731708 CCTTGGTGGATAGACGCTGGGAGTCGTTGAAGTAAGCAGGTACGGTAACTACGGCCTTCT 4731649 Query 7740 TGAC 7743 |||| Sbjct 4731648 TGAC 4731645 >seq12 Length=1303331 Score = 143 bits (158), Expect = 3e-29 Identities = 296/434 (68%), Gaps = 15/434 (3%) Strand=Plus/Minus Query 7331 GAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGG 7390 ||||| | ||||||||||| ||||| || || | || | |||||| || ||||| | Sbjct 966620 GAAGAAAGGGTTCGCTTTGCACGCTCGCATGCTGATCTCAGACGACGCAGAGCACGGGCA 966561 Query 7391 TTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGG 7447 | ||| || || | ||| || || | || ||||| | |||||| |||| ||| Sbjct 966560 TCACCCTCGATGTCCTGCTTGTGCTTCCTCTTGAACTCAGCCTTGAAGTGCTCGAGCAGG 966501 Query 7448 AGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCA 7507 | | | ||||| || || || |||||||| || || || ||||| || ||||| | Sbjct 966500 -GCGTTG--TCGAAGTCCTCTCCTCCCAAGTGAGTGTCACCAGCGGTAGCCTTGACGGCG 966444 Query 7508 AAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAA 7567 |||| ||||| ||| | | | || ||||| || ||||||||||| || || || Sbjct 966443 AAGACCCCTCCGGTGATGGTGAGAAGGGAGACATCGAAAGTACCACCACCAAGATCGAAG 966384 Query 7568 ATGAGTACGTT-CGTATCGTC--GTCTTTGTTCTT------ATCGAGACCGTACGCGATA 7618 ||||| ||| | || | || ||| |||| || |||||||||||| ||||| Sbjct 966383 ATGAGAACGGTGCGCTCCTTCTTGTCCTTGTCGTTGGCGGCATCGAGACCGTAAGCGATG 966324 Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 || || || || || || || || ||||| ||| | || ||||| || || | ||| Sbjct 966323 GCGGCAGCGGTGGGCTCGTTGATGATACGGAGAACATCGAGACCAGCGATGGTACCGGCA 966264 Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738 ||||| || | | || || || ||||| |||||||| || || || || || || | | Sbjct 966263 TCTTTGGTGGAAAGACGCTGGGAGTCGTTGAAGTAGGCAGGTACGGTGACAACAGCCTTC 966204 Query 7739 GTGACTTTCTTACC 7752 |||| |||| || Sbjct 966203 TTGACGGTCTTGCC 966190 >seq2 Length=3751008 Score = 98.7 bits (108), Expect = 1e-15 Identities = 178/257 (69%), Gaps = 5/257 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||| || || | || ||||| || || || || ||||| || | || Sbjct 757376 ATCGAAATCTTCTCCTCCTAGATGGGTATCACCAGCCGTAGCGAGAACTTCGAACACGCC 757317 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | | || | | | | ||| |||||||| |||||||| |||| ||| ||| || | Sbjct 757316 TTCCTCGACGGACAGAAGCGAGACATCAAAAGTACCACCGCCCAAATCATAAACGATGA- 757258 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || | ||| ||| ||| | |||||||||||||| || || || || |||| Sbjct 757257 --TC-TGTCGCTCGGGACCAGACTTGTTTAGACCGTACGCGATGGCGGCTGCTGTGGGTT 757201 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || | || || || |||||||||||| ||||| | || ||||| || ||||||| Sbjct 757200 CGTTGACGATTCGGAGTACGTTCAGGCCAGCGATAGTACCGGCGTCTTTTGTGGCTTGTC 757141 Query 7695 GTTGCGAATCGTTAAAG 7711 |||| | ||||| ||| Sbjct 757140 GTTGAGCGTCGTTGAAG 757124 Score = 82.4 bits (90), Expect = 1e-10 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 7712 TAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATA 7771 ||||| ||||| || || || |||| ||||| ||||||||||| || | || ||||| Sbjct 757051 TAGGCGGGGACAGTGACTACTGCGTGTGTGACCTTCTTACCGAGGTAAGTCTCTGCGATC 756992 Query 7772 TCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || ||||||||| |||||||||| ||| | ||||||| Sbjct 756991 TCCTTCATTTTGCCGAGAACCATCGCTGATACTTCTTCAG 756952 >seq10 Length=1580403 Score = 82.4 bits (90), Expect = 1e-10 Identities = 164/240 (68%), Gaps = 5/240 (2%) Strand=Plus/Minus Query 11407 TCACGCTCATCGTTTGCCGCAAAC---CCATTCATACTTCTTTTCTTACCAATCGCATCA 11463 || ||||||||||| | |||| ||| ||| |||| ||||| |||||||| Sbjct 767880 TCTCGCTCATCGTTCCCTCCAAATTGACCACCTTTACCTCTTGCTTTACCGATCGCATCG 767821 Query 11464 ATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAATTCAAATATATCACGG 11523 |||||||| || |||| ||| | ||| ||| | ||| | | |||| || || Sbjct 767820 ATTTCATCAATGAAGACGATAGAAGGTGCATTCTTCTTTGCTGTTGCGAATAAGTCGCGC 767761 Query 11524 ACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGACCCCGAACACTGA-AT 11582 |||||| | || || || |||||||| || ||||| ||| || || || || | Sbjct 767760 ACTCTTGAAGAACCGACACCGACAAACATCTCGACGAATTCTGAACCAGAG-ACGGACAG 767702 Query 11583 AAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTTACCTGTACCTGG 11642 ||||||||| || ||| || ||| | || ||| | ||||||||||| |||||||| Sbjct 767701 GAAAGGAACGCCAGCTTCTCCAGCTGTGGCTTTTGCAAGCAGTGTTTTACCAGTACCTGG 767642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131577369360