Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 132 6e-26 seq29 123 3e-23 seq35 120 4e-22 seq23 120 4e-22 seq11 120 4e-22 seq4 86.0 8e-12 >seq1 Length=6229779 Score = 132 bits (146), Expect = 6e-26 Identities = 236/339 (70%), Gaps = 8/339 (2%) Strand=Plus/Plus Query 112006 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 112065 |||| ||||||||||||| |||||| || | |||||||| || ||||| ||||| | Sbjct 991431 TCTACATTGAGCCATGGCATGCGGATGTCTTCGAGTTCCTCGACTTGCGCAAGAACCACG 991490 Query 112066 GTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 112125 || | || || | || |||||||| |||| ||||||||||||||| ||| | |||| Sbjct 991491 GTAAAGAAGAAGTCCGAGCACGCGATCTTTTCTACGCTCTCTGGATTCCCGATATGTTCA 991550 Query 112126 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTC 112185 ||| |||| ||||||| || ||||| || | || || || | | ||||| | Sbjct 991551 TGAGACGAGTAGAGGAGAACGGTGATTGGCCTTTGTTCTGCCCCGCTGAAGCACCAAACC 991610 Query 112186 TCTCCGATGCCGTG---GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAA 112242 | || ||| ||| || ||||| || || | |||| | ||||||||| | ||| Sbjct 991611 T-TC--ATGAAGTGTACGGAGAGGAATTCGATGAGCTCTTCTTGAAGTACGAGAAGGAAG 991667 Query 112243 GTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAA 112301 | ||||| | ||| || | || | || | | ||| | |||||||| || |||| Sbjct 991668 GACGGGCAAAGAAGACTGT-CAAGGCTCAGAAGCTATGGTATGCTATTCTTGAGGCTCAG 991726 Query 112302 ACCGAGACTGGTACACCATATATGCTTTACAAAGACGCC 112340 || |||||||| | || | ||||| ||||| || ||| Sbjct 991727 ACTGAGACTGGAAACCCCTTCATGCTGTACAAGGATGCC 991765 >seq29 Length=171343 Score = 123 bits (136), Expect = 3e-23 Identities = 142/188 (76%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 102129 AAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGTCGCGTTCCTTTGCTGAGCGA 102185 || || || ||||| |||| ||| | | | |||| ||||| | ||||| |||| || Sbjct 54292 AAGGCTGAATGGGCAATGACTTGGATCTCAGACAAGCAGTCGTG---CTTTGGTGAGAGA 54236 Query 102186 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 102245 | | ||||| || ||| ||||| ||||||||||||||||| ||| ||| || | Sbjct 54235 TTGGTAGCATTCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTC 54176 Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305 |||||||||||||| || |||||||| ||||| ||||||||| ||||| |||| ||| Sbjct 54175 TGGCTCAAGAAGCGTGGACTCATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTGCCGT 54116 Query 102306 GACGAGGG 102313 || ||||| Sbjct 54115 GATGAGGG 54108 >seq35 Length=121122 Score = 120 bits (132), Expect = 4e-22 Identities = 141/188 (75%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 102129 AAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGTCGCGTTCCTTTGCTGAGCGA 102185 || || || ||||| |||| ||| | | | |||| ||||| | ||||| ||| ||| Sbjct 13956 AAGGCTGAATGGGCAATGACATGGATCTCAGACAAGCAGTCGTG---CTTTGGTGAACGA 13900 Query 102186 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 102245 | | || || || ||| ||||| ||||||||||||||||| ||| ||| || | Sbjct 13899 TTGGTAGCGTTCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTC 13840 Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305 |||||||||||||| || |||||||| ||||| |||||||||||||| |||| ||| Sbjct 13839 TGGCTCAAGAAGCGTGGACTCATGCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGT 13780 Query 102306 GACGAGGG 102313 || ||||| Sbjct 13779 GATGAGGG 13772 >seq23 Length=274361 Score = 120 bits (132), Expect = 4e-22 Identities = 141/188 (75%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 102129 AAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGTCGCGTTCCTTTGCTGAGCGA 102185 || || || ||||| |||| ||| | | | |||| ||||| | ||||| ||| ||| Sbjct 223787 AAGGCTGAATGGGCAATGACATGGATCTCAGACAAGCAGTCGTG---CTTTGGTGAACGA 223731 Query 102186 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 102245 | | || || || ||| ||||| ||||||||||||||||| ||| ||| || | Sbjct 223730 TTGGTAGCGTTCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTC 223671 Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305 |||||||||||||| || |||||||| ||||| |||||||||||||| |||| ||| Sbjct 223670 TGGCTCAAGAAGCGTGGACTCATGCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGT 223611 Query 102306 GACGAGGG 102313 || ||||| Sbjct 223610 GATGAGGG 223603 >seq11 Length=1302298 Score = 120 bits (132), Expect = 4e-22 Identities = 232/340 (68%), Gaps = 2/340 (1%) Strand=Plus/Plus Query 112002 GCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAAC 112061 ||| |||| |||||||||||||||||||| | | || ||||| || | ||| ||| Sbjct 896063 GCAATCTACATTGAGCCATGGCACGCGGATGTTTTCGAATTCCTCGACCTCCGTAAGAAC 896122 Query 112062 CAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTC 112121 || ||| | || || | ||| ||||| ||||||| |||||||||||| || || | Sbjct 896123 CACGGTAAAGAAGAAGTGCGCGCTCGCGACCTCTTCTACGCTCTCTGGATCCCCGACATG 896182 Query 112122 TTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCC 112181 ||||||| | || ||||| | ||| ||||| | ||||| || |||| | ||||| Sbjct 896183 TTCATGAGACGTGTAGAGGAAAATGGTGATTGGCCCCTCTTCTGCCCAGCTGAAGCACCA 896242 Query 112182 GGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAA 112241 || ||| | || |||||||| || | || | | ||||||||| | ||| Sbjct 896243 AACCTACACGAAGTTTACGGAGAGGAGTTCGATGAGCTGTTCTTGAAGTACGAGAAGGAA 896302 Query 112242 AGTCGGGCGACTGCGACGGTGCCAGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCA 112300 | || || | ||| || | || | | | | ||| | ||||||||| || |||| Sbjct 896303 GGACGCGCAAAGAAGACTGT-CAAGGCCCAGAAACTCTGGTATGCTATTCTCGAGGCTCA 896361 Query 112301 AACCGAGACTGGTACACCATATATGCTTTACAAAGACGCC 112340 || |||||||| | || | ||||| ||||| || ||| Sbjct 896362 GACTGAGACTGGAAACCCCTTCATGCTGTACAAGGATGCC 896401 >seq4 Length=2125370 Score = 86.0 bits (94), Expect = 8e-12 Identities = 267/406 (66%), Gaps = 7/406 (2%) Strand=Plus/Plus Query 15888 TCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCG 15947 || || ||||| || || || ||||| ||| || | || || ||||| || |||| Sbjct 442370 TCGAATCGACCAGGACGTAGCAGCGCACTATCTAGCACGTCCACTCGATTTGTACCGGCA 442429 Query 15948 ATGACAACAA-TACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAAT 16006 | || || | | || ||| || | | ||||| |||||||| | ||||| || | Sbjct 442430 AGAACGACTACTTGCTCTTTTGT-ACCGAAACCGTCCATCTCGACGAGGAGCTGATTGAG 442488 Query 16007 AGTTTGTTCCCGTTCATCATTCGCTG-GCAT--ACCACCAGCACTGCGTTGCTTTCCC-A 16062 || ||||| || ||||| | | || ||| || || | ||||||| || | Sbjct 442489 CGTGCTCTCCCGCTCGTCATTTCCACCGAATTGACCTCCCTTACCTC-TTGCTTTACCGA 442547 Query 16063 CGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGA 16122 |||||||||||||| || |||| ||| | ||| ||| | ||| | | |||| Sbjct 442548 TAGCATCAATCTCATCGATAAAGATGATAGAGGGTGCATTCTTCTTTGCGGTTGCGAAGA 442607 Query 16123 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 16182 |||| || || || | || ||||| ||||||||||| ||||| | || | || Sbjct 442608 GATCGCGGACTCGGGAAGAACCGACACCGACAAACATCTCGACAAACTCTGAACCAGATA 442667 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 || ||| || || | ||| || || | ||| ||| ||||| || ||||||| Sbjct 442668 CCGAGAGGAAAGGAACGCCTGCTTCTCCAGCTGTTGCTTTGGCAAGAAGTGTTTTACCCG 442727 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 | ||||| || | || || ||| ||||| |||||||| ||||| Sbjct 442728 TTCCTGGAGGCCCTGAGATGATGGCTCCTCGAGGAATCTTTGCGCC 442773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741205070880