Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq11 113 5e-20 seq35 87.8 2e-12 seq29 87.8 2e-12 seq23 87.8 2e-12 seq4 84.2 3e-11 >seq1 Length=6229779 Score = 118 bits (130), Expect = 1e-21 Identities = 231/336 (69%), Gaps = 4/336 (1%) Strand=Plus/Minus Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 ||||||||||| |||||| |||| | || ||||| ||||| | || ||||| || | | Sbjct 991764 GCATCCTTGTACAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATAGCATAC 991705 Query 106643 CACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 106701 || | | || | | || | ||| | || |||||||| ||| ||||||||| | | Sbjct 991704 CATAGCTTCTGAGCCTTG-ACAGTCTTCTTTGCCCGTCCTTCCTTCTCGTACTTCAAGAA 991646 Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761 ||| | || || ||||| || | | || || |||||| | | || ||||| Sbjct 991645 GAGCTCATCGAATTCCTCTCCGTACACTTCATGAAGGTTTGGTGCTTCAGCGGGGCAGAA 991586 Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821 | || ||| | ||| |||||| || || ||||||| | || |||||||| || | Sbjct 991585 CAAAGGCCAATCACCGTTCTCCTCTACTCGTCTCATGAACATATCGGGAATCCAGAGAGC 991526 Query 106822 TGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880 | || ||||| | | | | || | ||||| | ||| ||||| || || || |||| Sbjct 991525 GTAGAAAAGATCGCGTGCTCGGA-CTTCTTCTTTACCGTGGTTCTTGCGCAAGTCGAGGA 991467 Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 106916 |||| | || |||||| ||||||||||||| |||| Sbjct 991466 ACTCGAAGACATCCGCATGCCATGGCTCAATGTAGA 991431 >seq11 Length=1302298 Score = 113 bits (124), Expect = 5e-20 Identities = 230/339 (68%), Gaps = 2/339 (1%) Strand=Plus/Minus Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 ||||||||||| |||||| |||| | || ||||| ||||| | || |||||| || | | Sbjct 896400 GCATCCTTGTACAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCCTCGAGAATAGCATAC 896341 Query 106643 CACACAT-CGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 106701 || | | | | | || | ||| | || || ||||| ||| ||||||||| | | Sbjct 896340 CAGAGTTTCTGGGCCTTG-ACAGTCTTCTTTGCGCGTCCTTCCTTCTCGTACTTCAAGAA 896282 Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761 || | || |||||||| || | ||| || |||||| | |||| ||||| Sbjct 896281 CAGCTCATCGAACTCCTCTCCGTAAACTTCGTGTAGGTTTGGTGCTTCAGCTGGGCAGAA 896222 Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821 || | ||| | |||| ||||| || || ||||||| | ||| || ||||| || | Sbjct 896221 GAGGGGCCAATCACCATTTTCCTCTACACGTCTCATGAACATGTCGGGGATCCAGAGAGC 896162 Query 106822 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 106881 | ||||| || | | || | ||||| | ||| ||||| || | || ||||| Sbjct 896161 GTAGAAGAGGTCGCGAGCGCGCACTTCTTCTTTACCGTGGTTCTTACGGAGGTCGAGGAA 896102 Query 106882 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 106920 || | | |||||||||||||||||||| |||| ||| Sbjct 896101 TTCGAAAACATCCGCGTGCCATGGCTCAATGTAGATTGC 896063 >seq35 Length=121122 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 117291 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTT 117350 ||||||||| ||| | || || || || ||||| || || |||||||| || ||||| Sbjct 13771 ACCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTT 13830 Query 117351 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 117410 ||| | ||| | || ||| ||| || || ||||||||||| ||||| ||| || || Sbjct 13831 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 13890 Query 117411 CGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATTTCATTGCCCATT 117469 ||| | | || || | ||| | ||| |||| | | | |||| |||||||||||| Sbjct 13891 CGCTACCAATCGTTCACCAAAGCA-CGACTGCTTGTCTGAGATCCATGTCATTGCCCATT 13949 Query 117470 TCGCCTT 117476 ||||| Sbjct 13950 CAGCCTT 13956 >seq29 Length=171343 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 117291 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTT 117350 ||||||||| ||| | || || ||||| |||||| || || |||||||| || ||||| Sbjct 54107 ACCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGTCCACGCTT 54166 Query 117351 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 117410 ||| | ||| | || ||| ||| || || ||||||||||| ||||| ||| || || Sbjct 54167 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 54226 Query 117411 CGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATTTCATTGCCCATT 117469 || | | | ||| | ||| | ||| |||| | | | ||| |||||||||||| Sbjct 54227 TGCTACCAATCTCTCACCAAAGCA-CGACTGCTTGTCTGAGATCCAAGTCATTGCCCATT 54285 Query 117470 TCGCCTT 117476 ||||| Sbjct 54286 CAGCCTT 54292 >seq23 Length=274361 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 117291 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTT 117350 ||||||||| ||| | || || || || ||||| || || |||||||| || ||||| Sbjct 223602 ACCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTT 223661 Query 117351 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 117410 ||| | ||| | || ||| ||| || || ||||||||||| ||||| ||| || || Sbjct 223662 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 223721 Query 117411 CGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATTTCATTGCCCATT 117469 ||| | | || || | ||| | ||| |||| | | | |||| |||||||||||| Sbjct 223722 CGCTACCAATCGTTCACCAAAGCA-CGACTGCTTGTCTGAGATCCATGTCATTGCCCATT 223780 Query 117470 TCGCCTT 117476 ||||| Sbjct 223781 CAGCCTT 223787 >seq4 Length=2125370 Score = 84.2 bits (92), Expect = 3e-11 Identities = 162/238 (68%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 9359 TTGCTTTCCC-ACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGG 9417 ||||||| || | |||||||||||||| || |||| ||| | ||| ||| | | Sbjct 442536 TTGCTTTACCGATAGCATCAATCTCATCGATAAAGATGATAGAGGGTGCATTCTTCTTTG 442595 Query 9418 CGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9477 || || | ||||||||||| || | | || ||||| ||||||||||| ||||| | Sbjct 442596 CGGTTGCGAAGAGATCGCGGACTCGGGAAGAACCGACACCGACAAACATCTCGACAAACT 442655 Query 9478 TTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537 || | || || ||| || || | ||| || || | ||| ||| |||| Sbjct 442656 CTGAACCAGATACCGAGAGGAAAGGAACGCCTGCTTCTCCAGCTGTTGCTTTGGCAAGAA 442715 Query 9538 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 | || |||||||| ||||| || | || || ||| || || |||||||| ||||| Sbjct 442716 GTGTTTTACCCGTTCCTGGAGGCCCTGAGATGATGGCTCCTCGAGGAATCTTTGCGCC 442773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979664286960