Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 4e-15 >seq1 Length=6229779 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 47009 TTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCAT 47068 ||| ||||| | || ||||| |||||||| | |||| ||||||||||||| ||||| Sbjct 992813 TTTCGTTCGAAGGTAGTACATTCCAGTCTTGAGACCTTTCTTCCATCCATAGAAGTGCAT 992754 Query 47069 ACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATC 47128 | ||| | || || || | ||| | | || || || |||||||| ||||| Sbjct 992753 AGAAGTAAGTTGAGCGAAAGTGGGTGATTGCAAGTGGATGTTGAGAGATTGTGATTGATC 992694 Query 47129 AATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATAC 47188 || || || ||||| || |||| ||| || | ||| | | || ||||||||||| Sbjct 992693 GATGAAGGCTCCTCTGTCCGCTGACATGTCAATGATACTCTTCTGACTGATCTCCCATAC 992634 Query 47189 TGTTTTATAAATTTGTTTAATGTCTTCTGGGAG 47221 |||| |||||| |||||| || ||||| || Sbjct 992633 TGTTCGATAAATAGCTTTAATCTCATCTGGTAG 992601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107717940560