Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-13 seq26 89.7 4e-12 seq16 87.8 1e-11 >seq6 Length=1874668 Score = 95.1 bits (104), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 550320 CACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTG 550379 |||| ||| | || || || ||||| | | || ||| | | || || ||||| Sbjct 1319758 CACCTGAAGAGATCTCCTCCATGGTCCTCCTCAAGATGCGAGAGACCGCTGAGGCTTTCC 1319817 Query 550380 TTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAAC 550439 | ||| ||| || | | | || || || ||||| || || || || |||||||| || | Sbjct 1319818 TCGGTGGAGACGTCAAGCAGGCCGTCATCACTGTCCCTGCCTACTTCAATGACTCGCAGC 1319877 Query 550440 GTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATG 550499 |||||||||| || |||||||| | || || || | | ||||| ||||||||||| | Sbjct 1319878 GTCAAGCTACCAAGGATGCTGGTCAGATCGCCGGCATGCAGGTTCTCCGTATTATCAACG 1319937 Query 550500 AACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 | ||||| || ||||| | || || || || || || Sbjct 1319938 AGCCTACCGCCGCTGCTATCGCTTACGGTCTCGACAA 1319974 >seq26 Length=231437 Score = 89.7 bits (98), Expect = 4e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || || || ||||| || || || ||||| || |||||||||||| |||||| Sbjct 96747 GCCGTCATCACCGTCCCAGCCTACTTCAACGACTCTCAGCGTCAAGCTACTCGAGATGCC 96806 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || ||||| || || |||||| |||| ||||||| || || || || ||||| || Sbjct 96807 GGTGTCATTGCGGGTCTCGATGTTCGTCGTGTTATCAACGAGCCCACAGCCGCTGCTCTG 96866 Query 550520 GCATATGGACTTGA 550533 || || || ||||| Sbjct 96867 GCCTACGGTCTTGA 96880 >seq16 Length=893829 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 394046 TGTGGTAGTCCCACTTCATTAAGAGCAATATTTGGATCCGAGGTAATAACTGTACGACCT 394105 || |||| ||| |||| | ||| | | ||| ||||| ||||| ||||||||| || Sbjct 726198 TGCGGTACTCCGACTTGGTCCAGATCCAGATTAGGATCACCAGTAATGACTGTACGAGCT 726139 Query 394106 GACATATCCACACGTTTTCCCATAAGATTTCCACGAATTCTACCTTCTTTACC 394158 || | |||||| ||||||||||| ||||||||||| | | ||||||||||| Sbjct 726138 GAGAAATCCACTCGTTTTCCCATCAGATTTCCACGTAAACGGCCTTCTTTACC 726086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029287855785460