Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 3e-14 seq5 89.7 4e-13 seq12 86.0 5e-12 >seq1 Length=6229779 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338 || || || || || ||||| | | ||||| |||| |||| || || || ||||| Sbjct 4307396 TCCTTCTGGATGTTATAATCCGAAAGGGTTCTTCCATCTTCCAGCTGTTTTCCCGCAAAG 4307337 Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398 ||||| ||||||||||| || ||||| ||||| |||||||| || || || ||| Sbjct 4307336 ATCAACCGCTGTTGATCAGGTGGAATACCTTCCTTATCTTGGATCTTGCTCTTGACAGCA 4307277 Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458 || | ||||| || | || ||||| | || | || ||||| || ||||| || || Sbjct 4307276 TCGATCGTGTCTGAAGACTCGACTTCTAATGTAATTGTCTTGCCAGTCAAAGTCTTGACG 4307217 Query 101459 AATATCTGCATGGTTACGCGAAGA 101482 || || ||||| | | |||||| Sbjct 4307216 AAGATTTGCATACCTCCTCGAAGA 4307193 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||||| | ||| | ||| | |||||| |||||||| || || |||||||| |||| | Sbjct 4307204 CCTCCTCGAAGACGGAGAACGAGATGAAGCGTAGATTCCTTCTGGATATTGTAGTCGGAG 4307145 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTG 101352 | || | | |||| ||||||||||| || || || ||||| |||||||| Sbjct 4307144 AGTGTACGGCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGTTG 4307095 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||||||||| || || || ||||| |||| || |||| |||| || | || Sbjct 3067049 ATGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCATCCTCGAGCTG 3066990 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGC 101366 ||| ||||| || || | |||||||||||||||||| |||| Sbjct 3066989 CTTGCCTGCGAAGATGAGACGCTGTTGATCGGGCGGGATGC 3066949 >seq5 Length=2077020 Score = 89.7 bits (98), Expect = 4e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 101319 CCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTT 101378 ||| ||||| |||||||||||||| |||||| |||||||| ||||| |||||||| |||| Sbjct 1908799 CCAGTTGCTGACCTGCAAATATCAGACGCTGCTGATCGGGTGGAATTCCTTCTTTGTCTT 1908740 Query 101379 GAATTTT 101385 ||||||| Sbjct 1908739 GAATTTT 1908733 >seq12 Length=1303331 Score = 86.0 bits (94), Expect = 5e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||||| | ||| | || | |||||| || |||||||| || || ||||| |||| | Sbjct 512291 CCTCCTCGAAGACGGAGTACGAGATGAAGCGTGGATTCTTTCTGGATGTTGTAGTCGGAG 512232 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTG 101352 | ||| | | |||| ||||||||||| || || || ||||| |||||||| Sbjct 512231 AGAGTGCGGCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGTTG 512182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277656234978