Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq12 118 8e-22 seq1 98.7 8e-16 >seq12 Length=1303331 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 |||||| || ||||||||||| || || |||||||| || || || |||| | || || Sbjct 512502 CACCAAGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCTGAAAGGGTTCGTCCATCTTC 512443 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 || ||| ||||| ||||| || |||| ||||||||| | || | || ||||| || Sbjct 512442 CAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGTGGGATACCTTCCTTATCTTG 512383 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 ||||| || |||| | | | | || |||| ||| || |||| ||||| || || Sbjct 512382 GATCTTGCTCTTGACAGCATCAATCGTATCGGACGACTCGACTTCCAAAGTAATGGTCTT 512323 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| ||||| || || ||||| || ||||| Sbjct 512322 TCCTGTCAATGTCTTGACAAAGATTTGCAT 512293 >seq1 Length=6229779 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || ||||||||||| || || || || ||||| || || ||| | || ||| Sbjct 4307414 ACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAAAGGGTTCTTCCATCTTCC 4307355 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||| || || ||||| |||| ||||||||||| | |||| || ||||| || Sbjct 4307354 AGCTGTTTTCCCGCAAAGATCAACCGCTGTTGATCAGGTGGAATACCTTCCTTATCTTGG 4307295 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || |||| | | | | ||||| | ||| || || | ||||| || || Sbjct 4307294 ATCTTGCTCTTGACAGCATCGATCGTGTCTGAAGACTCGACTTCTAATGTAATTGTCTTG 4307235 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || || || || ||||| Sbjct 4307234 CCAGTCAAAGTCTTGACGAAGATTTGCAT 4307206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936885027742