Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq11 196 9e-45 seq29 194 3e-44 seq35 187 5e-42 seq23 187 5e-42 seq1 138 2e-27 >seq11 Length=1302298 Score = 196 bits (216), Expect = 9e-45 Identities = 647/991 (65%), Gaps = 50/991 (5%) Strand=Plus/Minus Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATG 212636 ||||| || ||||| || |||||||| || ||||| || || || |||||||| | | Sbjct 897456 GCAGCTTTTGTGCGGAGGTAGTACATTCCCGTCTTGAGACCTTTCTTCCAGCCGTAAAAG 897397 Query 212637 TGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAGG 212696 ||||| | |||||||| ||| || || || ||| || || | Sbjct 897396 TGCATGGATGTGAGTTG----AGCGAAAGTG---GGGGAT-----TGG---AGGTGGATA 897352 Query 212697 TTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCT 212756 || || || || || || || || | | | ||||| || | |||||| ||||| || Sbjct 897351 TTGAGTGATTGCGATTGATCAATAAACGCGCCTCTGTCTGCAGACATGTCAATGATG-CT 897293 Query 212757 CT-CTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 || ||| || ||||||||| || || |||| | |||| || ||||| | | || Sbjct 897292 CTTCTGACTGATCTCCCACACTGTTCTGTAGATAGCCTTGATCTCATCTGGTAGGAAAGG 897233 Query 212816 GATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872 |||| || ||||| || ||| ||| | || | | | | || |||||||| Sbjct 897232 AATGTGTTGGACAGAGCCTTGGTGAGCAATGATGAGGTTCTTGAGA---TCTTCGTTCCA 897176 Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGA---GGGTTGACTATCTGGAAGTCACC 212929 | ||| | |||| | || | ||| | |||||||| || ||||| || || Sbjct 897175 GTAGCC---GAGATCCACGAGCTCGCGAAGGAGCCATGGGTTGACAATTTGGAACTCGCC 897119 Query 212930 TGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCC 212989 | | || | | ||| | ||| |||||||| ||||| | || ||||||| ||| Sbjct 897118 AGCCAAGACACGTCGAGTGTAGATGTTGGAAGTGTAAGGCTCAAAGCACTCGTTGAACCC 897059 Query 212990 CAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCC 213049 || ||||| | ||| || |||||||| ||||| | |||||| ||| | | ||| Sbjct 897058 GAGGATCTGAGAGGTGGAAGCGGTGGGCATAGGAGCGAGAAGGAGAGAGTTGCGAAGTCC 896999 Query 213050 GTGCTCGCCGATGAGGCGCCGAAGCTCT-GCCCAGTCCCATCTGCCAGACAGGTCCTCGT 213108 ||| |||| |||| | ||| || | ||||||||||||||| | || ||| Sbjct 896998 GTGTTCGCGGATGTTG-GCCTTGGCAGTTGCCCAGTCCCATCTGTCGGA-AGGAG----- 896946 Query 213109 CCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAG 213168 | ||| ||||| || ||||| | ||||| | | || ||| || ||| Sbjct 896945 ---TGACGCCCCACAGATCGAACTGGAGCTCGCCTTGGGAAGCTGGAGAGCCAGGGAAAG 896889 Query 213169 AGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGA 213228 | ||| |||| | ||||| || || ||||| || |||| || ||||||| ||||| Sbjct 896888 ACTGATAGTGGCCTTCTTCCTTTGCGAGTTCGCAAGAAGCCTCGAGAGCAGCGTGGTAGA 896829 Query 213229 TGGTTTCAAATATCTCCCTGTTGAGCTTCTTG-GCCTCTGGGGACGTGAAGGGCATCATC 213287 |||| || || || ||| |||| || | | | || || ||| ||| ||||| Sbjct 896828 TGGTCTCGAAGATGTCCTTGTTCAG-TCGTCGAGCATCAGGGCTGTCGAAAGGCATGCGA 896770 Query 213288 AT-GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346 | || || || |||| || || || || || ||||| |||||||| | || | | Sbjct 896769 AGAGCCATGAAAG-CATCTGCAAGACCTTGCACACCGATTCCGATGGGGCGATGACGGAA 896711 Query 213347 GTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTT 213406 ||| || || | ||||| | ||||||||||||| |||||||| ||| || | ||| Sbjct 896710 GTTGGAGTTTTGGGCCTCCTTAACGGGGTAAAAGTTGACGTCGATGACCTTATTCAAGTT 896651 Query 213407 GCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTC 213466 || | | | ||||||||||| | | ||| | || | |||| ||| | ||||| Sbjct 896650 TCGTGCGACTACTTTGGTGACGTCGTGCAGCTTCTGGAAATTGTACA------CACCGTC 896597 Query 213467 CTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTC 213526 || | || ||| || ||||| |||| |||||| ||||| ||||| | | | | Sbjct 896596 CTTGATGAAGGTAGGAAGAGCGATAGAAGCCAAGTTGCAGACGGCGACCTCGTCGGGGGC 896537 Query 213527 TGTGTACTCCATGATCTCGGTGCACAGGTTG 213557 | |||||| |||||||| ||||||| |||| Sbjct 896536 AGAGTACTCGATGATCTCAGTGCACAAGTTG 896506 >seq29 Length=171343 Score = 194 bits (214), Expect = 3e-44 Identities = 360/522 (69%), Gaps = 11/522 (2%) Strand=Plus/Plus Query 48152 CCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGT 48211 || || || |||| ||||||| | ||||||||| ||||||||||||| || | || Sbjct 54108 CCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGTCCACGCTTC 54167 Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271 ||||||||||| || || |||||||| |||||||||||||||||||| || || ||||| Sbjct 54168 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAT 54227 Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331 || | ||||| || || | | | ||||||||||||||| | | ||||| || Sbjct 54228 GCTACCAATCTCTCACCAAAGCACGACTGCTTGTCTGAGATCCAAGTCATTGCCCATTCA 54287 Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG-CTTCTTGCACTCACC 48390 ||||| ||||||| ||||||||||| ||||| ||| || | | || | || Sbjct 54288 GCCTTGCGCTTGATGGCAGGCATCGTCTCGATGGCATTGAATAGACGTGTT-CGCT---G 54343 Query 48391 TGCG--TCCGC-AACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTC 48447 |||| | ||| | |||||| || || | ||| | || | ||| | || || Sbjct 54344 TGCGGTTTCGCGGATGTAGGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTC 54403 Query 48448 TATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAA 48507 || ||||||||| ||||||||| ||||||||| || || ||||| || ||| Sbjct 54404 AATCATGATCTGGAAGCCGTAGAAGCACCTGGCCTCTGCGACTTGGACTTCGCTGCTGAA 54463 Query 48508 TCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATG 48567 || || || || ||||| ||||| || || || | || || ||||| || || || || Sbjct 54464 TCGTTCTAGGAGGTTCTCGTTGACGATACCGTCGGCAGAGGCGAAGAATGCGAGTACGTG 54523 Query 48568 TTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTACGTCTTTGCC 48624 | ||| | ||| |||| | | |||| || |||| | || | ||| || Sbjct 54524 AGAGATGAAGTAGCGTTCGTCCTTGTTGAGCTTGTTCTCCCAGTCGTGCAGGTCCTTTGA 54583 Query 48625 CAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTT 48666 ||||| | || || | |||||||||||||| |||||| Sbjct 54584 GAGGTCAATCTCCTCTGCGGTCCAGAAGGACGCCTCTGCTTT 54625 >seq35 Length=121122 Score = 187 bits (206), Expect = 5e-42 Identities = 291/416 (70%), Gaps = 0/416 (0%) Strand=Plus/Plus Query 48152 CCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGT 48211 || || || |||| ||||||| |||||||||| ||||||||||||| || | || Sbjct 13772 CCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTC 13831 Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271 ||||||||||| || || |||||||| |||||||||||||||||||| || || |||||| Sbjct 13832 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAC 13891 Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331 || | | || || || | | | ||||||||||||||| | | ||||| || Sbjct 13892 GCTACCAATCGTTCACCAAAGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCATTCA 13951 Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCT 48391 ||||| ||||||| |||||||||||| ||||| ||| || | | || | Sbjct 13952 GCCTTGCGCTTGATGGCTGGCATCGTCTCGATGGCATTGAAAAGACGTGTCCTCTGGGCA 14011 Query 48392 GCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATA 48451 | || | || ||| || || | ||| | || | ||| | || || || Sbjct 14012 GTTTCGCGGATGTATGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTCAATC 14071 Query 48452 GCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTC 48511 ||||||||| ||||||||| ||||||||| ||||| ||||| || ||||| | Sbjct 14072 ATGATCTGGAAGCCGTAGAAGCACCTGGCCTCGGCGACCTGGACTTCGCTGCTGAATCGC 14131 Query 48512 TCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATG 48567 || || || ||||| ||||| || ||||| | | ||| ||||| || || || || Sbjct 14132 TCTAGGAGGTTCTCGTTGACGATACCATCGGCGGAAGCGAAGAATGCGAGTACGTG 14187 >seq23 Length=274361 Score = 187 bits (206), Expect = 5e-42 Identities = 291/416 (70%), Gaps = 0/416 (0%) Strand=Plus/Plus Query 48152 CCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGT 48211 || || || |||| ||||||| |||||||||| ||||||||||||| || | || Sbjct 223603 CCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTC 223662 Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271 ||||||||||| || || |||||||| |||||||||||||||||||| || || |||||| Sbjct 223663 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAC 223722 Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331 || | | || || || | | | ||||||||||||||| | | ||||| || Sbjct 223723 GCTACCAATCGTTCACCAAAGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCATTCA 223782 Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCT 48391 ||||| ||||||| |||||||||||| ||||| ||| || | | || | Sbjct 223783 GCCTTGCGCTTGATGGCTGGCATCGTCTCGATGGCATTGAAAAGACGTGTCCTCTGGGCA 223842 Query 48392 GCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATA 48451 | || | || ||| || || | ||| | || | ||| | || || || Sbjct 223843 GTTTCGCGGATGTATGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTCAATC 223902 Query 48452 GCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTC 48511 ||||||||| ||||||||| ||||||||| ||||| ||||| || ||||| | Sbjct 223903 ATGATCTGGAAGCCGTAGAAGCACCTGGCCTCGGCGACCTGGACTTCGCTGCTGAATCGC 223962 Query 48512 TCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATG 48567 || || || ||||| ||||| || ||||| | | ||| ||||| || || || || Sbjct 223963 TCTAGGAGGTTCTCGTTGACGATACCATCGGCGGAAGCGAAGAATGCGAGTACGTG 224018 >seq1 Length=6229779 Score = 138 bits (152), Expect = 2e-27 Identities = 454/692 (66%), Gaps = 33/692 (5%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| |||||||| || || | | || | | ||| | ||| |||||||| Sbjct 992503 GGGTTGACAATCTGGAACTCGCCGGCCAAGACACGTCGAGTGTAGATGTTGGAAGTGTAT 992444 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || ||||||| || |||||||| | |||| ||||| ||||| ||||| Sbjct 992443 GGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAAGTGGAAGCTGTAGGCATAGGAGCG 992384 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTC 213085 | ||||| ||| | | ||||| || | |||| ||| | | | ||||||||| Sbjct 992383 AGAAGGAGCGAGTTGCGAAGACCGTGTTCTCGGATGTTGGCCTTGGTGGT-TGCCCAGTC 992325 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGAT-GCCTT 213144 |||||| | || ||| | ||| ||| | || || || ||| | ||||| Sbjct 992324 CCATCTATCGGA-AGGAG--------TGACGCCCCATAGATCGAATTG-AAGCTCGCCTT 992275 Query 213145 ----TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 |||| || || || | || || | || ||||||| || || ||| Sbjct 992274 GAGATGCT----GGAGAACCAGGGAATGACTGATAATGACCTTGCTCCTGAGCGAGTTCG 992219 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 || || |||| || ||||| | |||||| || || || || ||| ||||||| | | | Sbjct 992218 CAAGAAGCCTCAAGAGCAGCATGGTAGATAGTCTCGAAGATATCCTTGTTGAG-TCGTCG 992160 Query 213261 -GCCTCTGGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGA 213318 || || ||| ||| ||||| | || || || |||| || || ||||| | Sbjct 992159 AGCATCAGGGCTATCGAAAGGCATGCGAAGAGCCATGAAAG-CATCTGCAAGACCCTGCA 992101 Query 213319 CCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAA 213377 | ||||| ||||| || | || | | ||| || || |||| ||||| | |||||| Sbjct 992100 CACCGATACCGATAGGGCGATGACGGAAGTTGGAGTTCTGAGC-CTCCTTGACGGGGTAG 992042 Query 213378 AAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGG 213437 |||||| ||||| | |||||| | ||| | | | ||||||||||| | | ||| Sbjct 992041 AAGTTGACATCGATAACCTTGTTCAAGTTTCTTGCAACTACTTTGGTGACGTCGTGCAGC 991982 Query 213438 TACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCC 213497 | || | ||| ||| | || |||| | || || || |||||| |||| Sbjct 991981 TTCTGGAAGTTGTACA------CTCCATCCTTGATGAATGTGGGAAGAGCGATGGAGGCC 991928 Query 213498 AGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557 | |||||| ||||| ||||| | || | | |||||| |||||||| ||||||| |||| Sbjct 991927 AAGTTGCACACGGCGACCTCGTCAGGAGCAGAGTACTCGATGATCTCAGTGCACAAGTTG 991868 Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTT 213589 | ||| || || ||||||| ||||| Sbjct 991867 GAGTTCTTGATCGTTCCAAGGTTCTTCTGGTT 991836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531006799360