Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq35 183 6e-41 seq23 183 6e-41 seq29 178 2e-39 seq11 86.0 1e-11 seq1 86.0 1e-11 >seq35 Length=121122 Score = 183 bits (202), Expect = 6e-41 Identities = 357/511 (70%), Gaps = 21/511 (4%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTA 25566 ||||||||| || ||||| || || | ||||| | ||| |||| | |||| | Sbjct 14272 CTGGACCGCAGAGGAGATCGACCTCTCAAAGGATCTCCACGACTGGGAGAACAAGCTCAA 14213 Query 25567 TCCAAAGACGAGCAGCATTTTC-TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGG 25625 ||| ||||| | | | ||| || |||| | |||||||| || || | ||||| Sbjct 14212 --CAAGGACGAAC-GTTTCTTCATCTCTCACGTACTCGCATTCTTCGCTTCCGCCGATGG 14156 Query 25626 TATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAA 25685 ||| || |||||||| || ||| |||||| ||| ||||| ||| || ||||||| Sbjct 14155 TATCGTCAACGAGAACCTCCTAGAGCGATTCAGCAGCGAAGTCCAGGTCGCCGAGGCCAG 14096 Query 25686 GTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCT 25745 ||| |||||||| |||||||| || ||||| | ||| | || || || || || Sbjct 14095 GTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCACGCAGAAGTCTACTCCCTCCT 14036 Query 25746 TCT-GATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGC 25804 | ||| || ||||| || ||| |||| || || || |||||||||| Sbjct 14035 CATCGAT-ACATACATCCGCGAAACTGCCCAGAGGACACGTCTTTTCAATGCCATCGAGA 13977 Query 25805 ACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG 25864 || || ||||||| | ||||| ||||| |||| |||||| ||| || ||| Sbjct 13976 CGATGCCAGCCATCAAGCGCAAGGCTGAATGGGCAATGACATGGATCT-CAGACA-AGCA 13919 Query 25865 CTACGT---TTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCG 25921 | ||| |||| || || ||||||| || || ||||| ||||||||||| ||| | Sbjct 13918 GT-CGTGCTTTGGTGAACGATTGGTAGCGTTCGCCGCTGTAGAGGGCATCTTCTTCTCTG 13860 Query 25922 GTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTT 25980 |||| || || |||||||||||||||||| || | |||| |||||| || || ||| || Sbjct 13859 GTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGC-GTGGACTCATGCCTGGTCT-TACATT 13802 Query 25981 -TCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 ||||||||||||||| || | || |||||| Sbjct 13801 CTCCAACGAGCTCATCTGCCGTGATGAGGGT 13771 >seq23 Length=274361 Score = 183 bits (202), Expect = 6e-41 Identities = 357/511 (70%), Gaps = 21/511 (4%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTA 25566 ||||||||| || ||||| || || | ||||| | ||| |||| | |||| | Sbjct 224103 CTGGACCGCAGAGGAGATCGACCTCTCAAAGGATCTCCACGACTGGGAGAACAAGCTCAA 224044 Query 25567 TCCAAAGACGAGCAGCATTTTC-TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGG 25625 ||| ||||| | | | ||| || |||| | |||||||| || || | ||||| Sbjct 224043 --CAAGGACGAAC-GTTTCTTCATCTCTCACGTACTCGCATTCTTCGCTTCCGCCGATGG 223987 Query 25626 TATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAA 25685 ||| || |||||||| || ||| |||||| ||| ||||| ||| || ||||||| Sbjct 223986 TATCGTCAACGAGAACCTCCTAGAGCGATTCAGCAGCGAAGTCCAGGTCGCCGAGGCCAG 223927 Query 25686 GTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCT 25745 ||| |||||||| |||||||| || ||||| | ||| | || || || || || Sbjct 223926 GTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCACGCAGAAGTCTACTCCCTCCT 223867 Query 25746 TCT-GATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGC 25804 | ||| || ||||| || ||| |||| || || || |||||||||| Sbjct 223866 CATCGAT-ACATACATCCGCGAAACTGCCCAGAGGACACGTCTTTTCAATGCCATCGAGA 223808 Query 25805 ACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG 25864 || || ||||||| | ||||| ||||| |||| |||||| ||| || ||| Sbjct 223807 CGATGCCAGCCATCAAGCGCAAGGCTGAATGGGCAATGACATGGATCT-CAGACA-AGCA 223750 Query 25865 CTACGT---TTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCG 25921 | ||| |||| || || ||||||| || || ||||| ||||||||||| ||| | Sbjct 223749 GT-CGTGCTTTGGTGAACGATTGGTAGCGTTCGCCGCTGTAGAGGGCATCTTCTTCTCTG 223691 Query 25922 GTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTT 25980 |||| || || |||||||||||||||||| || | |||| |||||| || || ||| || Sbjct 223690 GTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGC-GTGGACTCATGCCTGGTCT-TACATT 223633 Query 25981 -TCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 ||||||||||||||| || | || |||||| Sbjct 223632 CTCCAACGAGCTCATCTGCCGTGATGAGGGT 223602 >seq29 Length=171343 Score = 178 bits (196), Expect = 2e-39 Identities = 354/513 (69%), Gaps = 25/513 (5%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTA 25566 ||||||||| || |||||||| || | |||||| || ||| |||| | |||| | Sbjct 54608 CTGGACCGCAGAGGAGATTGACCTCTCAAAGGACCTGCACGACTGGGAGAACAAGCTCAA 54549 Query 25567 TCCAAAGACGAGCAGCATTT----TCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGA 25622 ||| ||||| | | || ||||| |||| | |||||||| || | | || Sbjct 54548 --CAAGGACGAACGCTACTTCATCTCTCACGTAC----TCGCATTCTTCGCCTCTGCCGA 54495 Query 25623 TGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGC 25682 ||||| || |||||||| || || |||||| ||| ||||| || || ||||| Sbjct 54494 CGGTATCGTCAACGAGAACCTCCTAGAACGATTCAGCAGCGAAGTCCAAGTCGCAGAGGC 54435 Query 25683 CAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAA 25742 || ||| |||||||| |||||||| || ||||| | ||| | || || || || Sbjct 54434 CAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCACGCAGAAGTCTACTCCCT 54375 Query 25743 GCTTCT-GATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCG 25801 || | ||| || ||||| || ||| || || || || || |||||||| Sbjct 54374 CCTCATCGAT-ACCTACATCCGCGAAACCGCACAGCGAACACGTCTATTCAATGCCATCG 54316 Query 25802 AGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGA 25861 || || || ||||||| | ||||| ||||| |||| |||||| ||| || | Sbjct 54315 AGACGATGCCTGCCATCAAGCGCAAGGCTGAATGGGCAATGACTTGGATCT-CAGACA-A 54258 Query 25862 GCGCTACGT---TTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918 || | ||| |||| ||| | ||||||| || || ||||| ||||||||||| ||| Sbjct 54257 GCAGT-CGTGCTTTGGTGAGAGATTGGTAGCATTCGCCGCTGTAGAGGGCATCTTCTTCT 54199 Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC 25977 ||||| || || |||||||||||||||||| || | |||| |||||| || || | Sbjct 54198 CTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGAAG-CGTGGACTCATGCCTGGTCTTACC 54140 Query 25978 TTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || ||||| ||||||||| || | || |||||| Sbjct 54139 TTCTCCAATGAGCTCATCTGCCGTGATGAGGGT 54107 >seq11 Length=1302298 Score = 86.0 bits (94), Expect = 1e-11 Identities = 179/259 (69%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 221406 CGCAAGACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTC 221464 ||||||| || || || |||||||||||||||||||| ||||| |||||| |||| Sbjct 896858 CGCAAGAA-GCCTCGAGAGCAGCGTGGTAGATGGTCTCGAAGATGTCCTTGTTCAGTCGT 896800 Query 221465 TTGGCCTCGGGAGAAGT-GAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCT 221522 || || || | || ||| ||||| || || | |||||| | || || || || | Sbjct 896799 CGAGCATCAGG-GCTGTCGAAAGGCATGCGAAGAGCCATGAAAG-CATCTGCAAGACCTT 896742 Query 221523 GTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGAT 221582 | || ||||| |||||||| | || | |||||| || || ||||| | Sbjct 896741 GCACACCGATTCCGATGGGGCGATGACGGAAGTTGGAGTTTTGGGCCTCCTTAACGGGGT 896682 Query 221583 AAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCA 221642 |||||||||||||||| | || || | ||| | | || ||||| || ||| || Sbjct 896681 AAAAGTTGACGTCGATGACCTTATTCAAGTTTCGTGCGACTACTTTGGTGACGTCGTGCA 896622 Query 221643 GCTTCTGGTGATTGAACAC 221661 |||||||| |||| |||| Sbjct 896621 GCTTCTGGAAATTGTACAC 896603 >seq1 Length=6229779 Score = 86.0 bits (94), Expect = 1e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 222311 CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCC 222370 ||||||||||| || | || ||||||||||||||| ||||||| ||||| || || Sbjct 991230 CCGATACCACCAGCATTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATACCA 991171 Query 222371 TCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGG 222425 || ||||| || || || | | | | || ||||| ||||||||||||| |||| Sbjct 991170 TCGATAGAATCTTCTTTCATGGTGACGAGGAAACATGACGACATCTGAGGGTTGG 991116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843011973760