Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 seq11 93.3 5e-14 seq35 87.8 2e-12 seq29 87.8 2e-12 seq23 87.8 2e-12 >seq1 Length=6229779 Score = 107 bits (118), Expect = 2e-18 Identities = 282/422 (67%), Gaps = 9/422 (2%) Strand=Plus/Plus Query 75524 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGG 75583 |||||| | || ||||| || || | ||| ||| || || || || |||||| | || Sbjct 991346 GGTATTGTACCTATGCTCCGAGTCTACAACAACACCGCTCGATACGTCGATCAAG-GAGG 991404 Query 75584 CGTC--GCAAG--GGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGA 75639 | | || | || || | || ||||| | || ||||||||||| ||| || | || Sbjct 991405 CAACAAGCGACCTGGAGCCTTTGCCATCTACATTGAGCCATGGCATGCGGATGTCTTCGA 991464 Query 75640 GTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA-GAGATCTCTTTT 75698 |||||| || || || ||||| ||| | ||||| | || | | | | ||||| || | Sbjct 991465 GTTCCTCGACTTGCGCAAGAACCACGGTAAAGAAGAAG-TCCGAGCACGCGATCTTTTCT 991523 Query 75699 CATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTC 75758 | || |||||||| || | ||||||| || || |||||| ||| | ||| || Sbjct 991524 ACGCTCTCTGGATTCCCGATATGTTCATGAGACGAGTAGAGGAGAACGGTGATTGGCCTT 991583 Query 75759 TTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCC 75818 | ||||| || | | |||||| || || | | || ||||| || || | | Sbjct 991584 TGTTCTGCCCCGCTGAAGCACCAAACCTTCATGAAGTGTACGGAGAGGAATTCGATGAGC 991643 Query 75819 TCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TT 75877 ||| | ||||| || |||| || | || || |||||| | || | | || | | Sbjct 991644 TCTTCTTGAAGTACGAGAAGGAAGGACGGGCAAAGAAGACTGT-CAAGGCTCAGAAGCTA 991702 Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | |||||||| | | ||||| |||||||||| || | ||||| ||||||||| Sbjct 991703 TGGTATGCTATTCTTGAGGCTCAGACTGAGACTGGAAACCCCTTCATGCTGTACAAGGAT 991762 Query 75938 GC 75939 || Sbjct 991763 GC 991764 >seq11 Length=1302298 Score = 93.3 bits (102), Expect = 5e-14 Identities = 284/433 (66%), Gaps = 7/433 (2%) Strand=Plus/Plus Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571 ||| | ||| | ||||| | || ||||| || || | ||| ||| || || || || Sbjct 895970 GGTTACTCAAACGGTATCGTCCCGATGCTGCGAGTCTACAACAACACCGCTCGATACGTC 896029 Query 75572 AATCAAGCGGGGCGTC--GCAAG--GGGTCCATCGCGGTCTACTTGGAACCATGGCATGC 75627 |||||| | ||| | || | || || | || ||||| | || |||||||| || Sbjct 896030 GATCAAG-GAGGCAACAAGCGACCTGGAGCCTTTGCAATCTACATTGAGCCATGGCACGC 896088 Query 75628 CGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAG 75687 ||| | | || ||||| || | || ||||| ||| | ||||| | || | | Sbjct 896089 GGATGTTTTCGAATTCCTCGACCTCCGTAAGAACCACGGTAAAGAAGAAGTGCGCGCTCG 896148 Query 75688 AGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGG 75747 || ||||| | | || ||||| || ||| | ||||||| || || ||||| ||| Sbjct 896149 CGACCTCTTCTACGCTCTCTGGATCCCCGACATGTTCATGAGACGTGTAGAGGAAAATGG 896208 Query 75748 TCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGA 75807 | | ||| | || ||||| |||| | |||||| || ||| | || ||||| Sbjct 896209 TGATTGGCCCCTCTTCTGCCCAGCTGAAGCACCAAACCTACACGAAGTTTACGGAGAGGA 896268 Query 75808 GTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGC 75867 ||| || | || | | ||||| || |||| || | || || |||||| | || Sbjct 896269 GTTCGATGAGCTGTTCTTGAAGTACGAGAAGGAAGGACGCGCAAAGAAGACTGT-CAAGG 896327 Query 75868 CGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGC 75926 | | || | ||| | ||||||||| | | ||||| |||||||||| || | |||| Sbjct 896328 CCCAGAAACTCTGGTATGCTATTCTCGAGGCTCAGACTGAGACTGGAAACCCCTTCATGC 896387 Query 75927 TTTACAAGGATGC 75939 | ||||||||||| Sbjct 896388 TGTACAAGGATGC 896400 >seq35 Length=121122 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 65026 AAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCGCTCCTTCGCCGAGCGCCT 65084 ||||| |||||||||||| |||| | | | |||| ||| | ||| | || || | Sbjct 13956 AAGGCTGAATGGGCAATGACATGGATCTCAGACAAGCAGTCG-TGCTTTGGTGAACGATT 13898 Query 65085 TTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTG 65144 | ||||| || ||| ||||| ||||||||||| || || ||| ||| || | || Sbjct 13897 GGTAGCGTTCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTG 13838 Query 65145 GTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGA 65204 | | |||||||| || |||||||| || || ||||| || || || || | ||| || Sbjct 13837 GCTCAAGAAGCGTGGACTCATGCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGTGA 13778 Query 65205 TGAGGGT 65211 ||||||| Sbjct 13777 TGAGGGT 13771 >seq29 Length=171343 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 65026 AAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCGCTCCTTCGCCGAGCGCCT 65084 ||||| |||||||||||| ||| | | | |||| ||| | ||| | ||| | | Sbjct 54292 AAGGCTGAATGGGCAATGACTTGGATCTCAGACAAGCAGTCG-TGCTTTGGTGAGAGATT 54234 Query 65085 TTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTG 65144 | || || || ||| ||||| ||||||||||| || || ||| ||| || | || Sbjct 54233 GGTAGCATTCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTG 54174 Query 65145 GTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGA 65204 | | |||||||| || |||||||| || || |||||| ||||| || || | ||| || Sbjct 54173 GCTCAAGAAGCGTGGACTCATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTGCCGTGA 54114 Query 65205 TGAGGGT 65211 ||||||| Sbjct 54113 TGAGGGT 54107 >seq23 Length=274361 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 65026 AAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCGCTCCTTCGCCGAGCGCCT 65084 ||||| |||||||||||| |||| | | | |||| ||| | ||| | || || | Sbjct 223787 AAGGCTGAATGGGCAATGACATGGATCTCAGACAAGCAGTCG-TGCTTTGGTGAACGATT 223729 Query 65085 TTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTG 65144 | ||||| || ||| ||||| ||||||||||| || || ||| ||| || | || Sbjct 223728 GGTAGCGTTCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTG 223669 Query 65145 GTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGA 65204 | | |||||||| || |||||||| || || ||||| || || || || | ||| || Sbjct 223668 GCTCAAGAAGCGTGGACTCATGCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGTGA 223609 Query 65205 TGAGGGT 65211 ||||||| Sbjct 223608 TGAGGGT 223602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568451603520