Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq12 113 8e-20 seq1 95.1 2e-14 >seq12 Length=1303331 Score = 113 bits (124), Expect = 8e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| ||||| || | |||| ||| || | ||||| || ||||| || | |||| Sbjct 512474 ATATTGTAGTCTGAAAGGGTTCGTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTC 512415 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||||||||| || || ||||| |||||||| || ||| | || | | ||| ||| Sbjct 512414 TGTTGATCAGGTGGGATACCTTCCTTATCTTGGATCTTGCTCTTGACAGCATCAATCGTA 512355 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||||| ||||| ||||| | ||| || || || ||||| | || || ||||| |||||| Sbjct 512354 TCGGACGACTCGACTTCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAGATTTGC 512295 Query 193359 AT 193360 || Sbjct 512294 AT 512293 >seq1 Length=6229779 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || ||||| || || | ||||| ||| || | |||||||| ||||| || || | | Sbjct 4307387 ATGTTATAATCCGAAAGGGTTCTTCCATCTTCCAGCTGTTTTCCCGCAAAGATCAACCGC 4307328 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||||||||| || || ||||| |||||||| || ||| | || | | || || Sbjct 4307327 TGTTGATCAGGTGGAATACCTTCCTTATCTTGGATCTTGCTCTTGACAGCATCGATCGTG 4307268 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || |||||||| ||||||| || || || || || || | || || || || |||||| Sbjct 4307267 TCTGAAGACTCGACTTCTAATGTAATTGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGC 4307208 Query 193359 AT 193360 || Sbjct 4307207 AT 4307206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899652668165280