Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq12 136 8e-27 seq1 114 3e-20 >seq12 Length=1303331 Score = 136 bits (150), Expect = 8e-27 Identities = 140/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| || || || | |||||| |||| |||| |||||||| |||||||| | ||| Sbjct 512475 GATATTGTAGTCTGAAAGGGTTCGTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCT 512416 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||||||||||||||| || ||||| |||||||| || || | || ||| | || | Sbjct 512415 CTGTTGATCAGGTGGGATACCTTCCTTATCTTGGATCTTGCTCTTGACAGCATCAATCGT 512356 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| ||||| || ||||| | ||||||||| || || || ||||| || | ||| || || Sbjct 512355 ATCGGACGACTCGACTTCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAGATTTG 512296 Query 192534 CAT 192536 ||| Sbjct 512295 CAT 512293 >seq1 Length=6229779 Score = 114 bits (126), Expect = 3e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| |||||||| || | |||| | |||| |||| ||||| || |||||||| || | Sbjct 4307388 GATGTTATAATCCGAAAGGGTTCTTCCATCTTCCAGCTGTTTTCCCGCAAAGATCAACCG 4307329 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||||||||||||||| || ||||| |||||||| || || | || ||| | || | Sbjct 4307328 CTGTTGATCAGGTGGAATACCTTCCTTATCTTGGATCTTGCTCTTGACAGCATCGATCGT 4307269 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||||| || || ||||||| ||||| || || ||||| || || || | || || || Sbjct 4307268 GTCTGAAGACTCGACTTCTAATGTAATTGTCTTGCCAGTCAAAGTCTTGACGAAGATTTG 4307209 Query 192534 CAT 192536 ||| Sbjct 4307208 CAT 4307206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984478057497900