Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq29 131 2e-24 seq35 104 3e-16 seq23 104 3e-16 >seq29 Length=171343 Score = 131 bits (144), Expect = 2e-24 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 868726 GTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTA 868785 ||||||||||||| | ||||| |||| |||||| | ||| ||||| | || ||||| Sbjct 53751 GTTGGTCTTGCCCGCCAGCGAAATCATCTCCATGAAGTCGAATGGGTTCGCCGAGTTGTA 53810 Query 868786 GTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCA 868845 |||||| || || || | | || || | ||| || |||||||||||||||||||| Sbjct 53811 GTGCTTCTCATTACCCAGTGCTACTAGTAGTCTGTCTGCTACAAACTCGATGTACTGGCA 53870 Query 868846 CATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTT 868905 ||| | | ||||||||||||||||| || || || | ||| | ||||| || Sbjct 53871 CATCTGCTCTGCGTTCATGCCGATGAGGCGGACGGGGAGGGCATCGGAGAGGAACTCCTT 53930 Query 868906 CTCGATCTCGACGGCCTCGACGATGAT 868932 |||||||||||||| | || |||||| Sbjct 53931 TTCGATCTCGACGGCTTGGAGGATGAT 53957 Score = 105 bits (116), Expect = 8e-17 Identities = 167/238 (70%), Gaps = 11/238 (5%) Strand=Plus/Plus Query 869635 GTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGAC 869694 ||||||||| || || ||||||||||||||| ||| ||| ||||||| |||||||| Sbjct 54392 GTGGATGTTTTCAATCATGATCTGGAAGCCGTAGAAGCACCTGGCCTCTGCGACTTGGAC 54451 Query 869695 CTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAA 869754 || | |||| || | ||||||||| ||||| |||||| | |||||| || Sbjct 54452 TTCGCTGCTGAATCGTTCTAGGAGGTTCTCGTTGACGATACCGTCGGCAGAGGCGAAGAA 54511 Query 869755 AGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGAC 869811 || || ||||| ||| |||| ||| ||||| | | ||||| | |||||| Sbjct 54512 TGCGAGTACGTGAGAGATGAAGTAGCGTTCGTCCTTGTTGAGCTTGTTCTCCCAGT---- 54567 Query 869812 GGTGTCGGCGCT----GAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTT 869865 ||| || || |||||| | |||||| |||||||||| || ||||| || || Sbjct 54568 CGTGCAGGTCCTTTGAGAGGTCAATCTCCTCTGCGGTCCAGAAGGACGCCTCTGCTTT 54625 Score = 89.7 bits (98), Expect = 6e-12 Identities = 154/222 (69%), Gaps = 9/222 (4%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || || | ||| | || ||| |||| || || |||||||| || ||||| Sbjct 54107 ACCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGTCCACGCTT 54166 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||||| |||| || ||||| ||||||||||| || ||||| || Sbjct 54167 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 54226 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | | | | ||| ||||| ||| || ||||| |||||| |||| || Sbjct 54227 TGCTACCAATCTCTCACCAAAG--CACGA----CTGCTTGTCTGAGATCCAAGTCATTGC 54280 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397 ||| || ||||| | | | | |||| ||| |||||||| Sbjct 54281 CCATTCAGCCTTGCGCTTGATGGCAGGCATCGTCTCGATGGC 54322 >seq35 Length=121122 Score = 104 bits (114), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 868726 GTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTA 868785 ||| ||||||||| ||||||| |||| |||||| | ||| ||||| | | ||| Sbjct 13414 GTTTGTCTTGCCCGCGAGCGAAATCATCTCCATAAAGTCGAATGGGTTTGTAGAACCGTA 13473 Query 868786 GTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCA 868845 |||||| ||| || || | | || || | || || || ||||||||||| ||||| Sbjct 13474 GTGCTTCTCGTTACCCAGTGCTACTAGTAGTCTATCTGCTACGAACTCGATGTATTGGCA 13533 Query 868846 CATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTT 868905 ||| | | ||||||||||| ||||| || || || | ||| || ||||| || Sbjct 13534 CATCTGCTCTGCGTTCATGCCAATGAGGCGGACGGGAAGGGCGTCGGACAGGAACTCCTT 13593 Query 868906 CTCGATCTCGACGGC 868920 ||||||||||||||| Sbjct 13594 CTCGATCTCGACGGC 13608 Score = 89.7 bits (98), Expect = 6e-12 Identities = 154/222 (69%), Gaps = 9/222 (4%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || || | ||| | |||||| || | || || |||||||| || ||||| Sbjct 13771 ACCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTT 13830 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||||| |||| || ||||| ||||||||||| || ||||| || Sbjct 13831 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 13890 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | | | || || ||||| ||| || ||||| |||||| |||| || Sbjct 13891 CGCTACCAATCGTTCACCAAAG--CACGA----CTGCTTGTCTGAGATCCATGTCATTGC 13944 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397 ||| || ||||| | | | | |||| ||| |||||||| Sbjct 13945 CCATTCAGCCTTGCGCTTGATGGCTGGCATCGTCTCGATGGC 13986 >seq23 Length=274361 Score = 104 bits (114), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 868726 GTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTA 868785 ||| ||||||||| ||||||| |||| |||||| | ||| ||||| | | ||| Sbjct 223245 GTTTGTCTTGCCCGCGAGCGAAATCATCTCCATAAAGTCGAATGGGTTTGTAGAACCGTA 223304 Query 868786 GTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCA 868845 |||||| ||| || || | | || || | || || || ||||||||||| ||||| Sbjct 223305 GTGCTTCTCGTTACCCAGTGCTACTAGTAGTCTATCTGCTACGAACTCGATGTATTGGCA 223364 Query 868846 CATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTT 868905 ||| | | ||||||||||| ||||| || || || | ||| || ||||| || Sbjct 223365 CATCTGCTCTGCGTTCATGCCAATGAGGCGGACGGGAAGGGCGTCGGACAGGAACTCCTT 223424 Query 868906 CTCGATCTCGACGGC 868920 ||||||||||||||| Sbjct 223425 CTCGATCTCGACGGC 223439 Score = 89.7 bits (98), Expect = 6e-12 Identities = 154/222 (69%), Gaps = 9/222 (4%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || || | ||| | |||||| || | || || |||||||| || ||||| Sbjct 223602 ACCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTT 223661 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||||| |||| || ||||| ||||||||||| || ||||| || Sbjct 223662 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 223721 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | | | || || ||||| ||| || ||||| |||||| |||| || Sbjct 223722 CGCTACCAATCGTTCACCAAAG--CACGA----CTGCTTGTCTGAGATCCATGTCATTGC 223775 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397 ||| || ||||| | | | | |||| ||| |||||||| Sbjct 223776 CCATTCAGCCTTGCGCTTGATGGCTGGCATCGTCTCGATGGC 223817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107126562038818