Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 seq12 95.1 1e-14 >seq1 Length=6229779 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | || || || || ||||| | ||||| || | | Sbjct 4307206 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACAATTACATTAGAAGTCGAGTCTTCA 4307265 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || ||||| || || || |||||| Sbjct 4307266 GACACGATCGATGCTGTCAAGAGCAAGATCCAAGATAAGGAAGGTATTCCACCTGATCAA 4307325 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || ||||||||||| ||| |||| | | || ||||||||| Sbjct 4307326 CAGCGGTTGATCTTTGCGGGAAAACAGCTGGAAGATGGAAGAACCCTTTCGGATTATAAC 4307385 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || |||||||| Sbjct 4307386 ATCCAGAAGGAGAGCACGCTCCACTTGGT 4307414 >seq12 Length=1303331 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || | || || || || ||||| | ||||| || | || Sbjct 512293 ATGCAAATCTTTGTCAAGACATTGACAGGAAAGACCATTACTTTGGAAGTCGAGTCGTCC 512352 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||| || ||||| || || || |||||| Sbjct 512353 GATACGATTGATGCTGTCAAGAGCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCAA 512412 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || ||||||||||| ||| ||| | | ||||| || || Sbjct 512413 CAGAGACTCATCTTTGCGGGTAAACAGCTGGAAGATGGACGAACCCTTTCAGACTACAAT 512472 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || ||||||||| Sbjct 512473 ATCCAGAAGGAGAGCACGCTGCACTTGGTG 512502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896733947120