Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq14 111 1e-19 seq5 109 5e-19 >seq14 Length=1183914 Score = 111 bits (122), Expect = 1e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 34399 TCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCC 34458 ||||| | |||||||||||| |||| ||||| || | || | ||||| || || Sbjct 323849 TCGTGAGCACCGTTGACGATGTATCGCTCGTTCTTCTCGTCAAATGTAGTTTGGGCACCG 323908 Query 34459 AGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATT 34518 |||||||| |||||| | || || ||||| | | ||| || | ||||| |||||||| Sbjct 323909 AGCTCGCAGCCGAAGAATTTGGTAGGGTACGTAGGCGGTCGGGCGAGCGCTTTGGCGATG 323968 Query 34519 TCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTG 34572 ||| |||||| ||||| |||||||| ||||| |||||||| || || ||| Sbjct 323969 TCGACCATGTTAGGAATGACTGTCTTGATACCGTTTCCCTTTCCCTCTACTTTG 324022 >seq5 Length=2077020 Score = 109 bits (120), Expect = 5e-19 Identities = 267/397 (67%), Gaps = 11/397 (3%) Strand=Plus/Plus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGT-GATA 34262 ||||||||| || ||||| || ||||||| ||| | || || | | | | ||| Sbjct 329905 GGCGGGTTTCGCAAGATGAATGTAGTGAGCTTGTGCTTCATGTCTA-CATCCTGACGATG 329963 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| ||||||||| | | | || |||| ||| || | | || ||| || || Sbjct 329964 TCCGCAAGCTTTGCAGTCACGGTAAATCATGTCCTTCTTGTTG---ATGAAGAGATCCGT 330020 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 ||| ||||| | || | || || | ||| || || ||| || | || || || Sbjct 330021 CTCTGGGTTCTTGCAGCCGGGGCAGAGCACGAATTTATCGATAAAGACGGTGAGAAGCTC 330080 Query 34383 CTGTAA-CTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGA 34441 | | || || | ||||| | ||||||||||||| |||| ||||| || | || | Sbjct 330081 GCGCAGTCTGGTCGCA-TCGTGTGCGCCGTTGACGATGTATCGCTCGTTCTTCTCGTCAA 330139 Query 34442 CCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTC 34501 ||||| || || |||||||| || ||| | || || ||||| | | ||| || Sbjct 330140 ATGTAGTTTGGGCACCGAGCTCGCAGCCAAAGAATTTGGTAGGGTACGTAGGCGGTCGGG 330199 Query 34502 CAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTC 34561 | ||||| |||||||| ||| ||||||| ||||| |||||||| ||||| || || | Sbjct 330200 CGAGCGCTTTGGCGATGTCGACCATGTTGGGAATGACTGTCTTGATACCGTTTCCTTTGC 330259 Query 34562 CTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAG 34596 | || || ||| | ||| | | |||||| ||||| Sbjct 330260 CCTCTACTTTGACCTGCAACT--GAGGCATTCTGTAG 330294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840825147922