Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 105 5e-17 seq16 86.0 5e-11 >seq1 Length=6229779 Score = 105 bits (116), Expect = 5e-17 Identities = 156/217 (72%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 400281 CAAAGAAGG-ATATAAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCG 400339 ||||||| | | | || |||||||| || | ||||| ||||| || || || || || | Sbjct 5369790 CAAAGAATGCAAAGAATTGTACCCTGATACTCACAGAAGGAGACTCTGCCAAGACTTTTG 5369849 Query 400340 CTATGTCTGGCCTTAATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAA 400399 |||| || || || || | |||||||| |||||| ||||||||||| ||||||| Sbjct 5369850 CTATTTCAGGTCTGGCGGTCGTAGGAAGAGACACTTATGGTGTTTTCCCACTGAGAGGAA 5369909 Query 400400 AACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTGCCGATAATGAGGAAATTACAG 400459 || | | |||||||| ||||||||| ||| | | | ||||||| ||| ||| ||| Sbjct 5369910 AATTGCTCAATGTTAGAGATGCTAGTGGAAAACAGTTAACGGATAATGTGGAGATT-CAG 5369968 Query 400460 CA-ATCaaaaaaaTTGTTGGACTTGAACAAGGAAAAG 400495 || | || || ||| | ||| | | || || |||| Sbjct 5369969 CACTTGAAGAAGATTCTGGGATTGCAGCATGGGAAAG 5370005 >seq16 Length=893829 Score = 86.0 bits (94), Expect = 5e-11 Identities = 104/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 432275 TGAAAGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGA 432334 || |||| | | ||||||||||| ||| | | |||||| |||||||||| || || || Sbjct 726073 TGCAAGACTAAAGGGTAAAGAAGGCCGTTTACGTGGAAATCTGATGGGAAAACGAGTGGA 726132 Query 432335 TATGTCTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGT 432394 | | || || |||||||| |||||| |||||||||| | | ||| | |||| || || Sbjct 726133 TTTCTCAGCTCGTACAGTCATTACTGGTGATCCTAATCTGGATCTGGACCAAGTCGGAGT 726192 Query 432395 TCCTC--TCATTATTGCGAAA 432413 || | ||| || |||||| Sbjct 726193 ACCGCATTCAATAGCGCGAAA 726213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740622839250804