Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq29 179 5e-39 seq35 167 3e-35 seq23 167 3e-35 >seq29 Length=171343 Score = 179 bits (198), Expect = 5e-39 Identities = 340/491 (69%), Gaps = 17/491 (3%) Strand=Plus/Minus Query 1455795 AAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCAC 1455854 || || ||||| ||||| |||||||| |||||| | |||||| ||| | | || Sbjct 54625 AAAGCAGAGGCGTCCTTCTGGACCGCAGAGGAGATTGACCTCTCAAAGGACCTGCACGAC 54566 Query 1455855 TGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTT 1455911 |||| | ||| | | | ||||| ||| | |||||| ||||| ||||| || || Sbjct 54565 TGGGAGAACAAGCTCAACAAGGACGAACGCTACTTCATCTCTCACGTACTCGCATTCTT- 54507 Query 1455912 CGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCA 1455971 |||| | ||| || ||||| ||||||||| | || || | | || ||||| Sbjct 54506 CGCCTCTGCCGACGGTATCGTCAACGAGAACCTCCTAGAACGATTCAGCAGCGAAGTCCA 54447 Query 1455972 ATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGA 1456031 | | ||||||| | | || ||||| ||||||||| || |||||||||||| | || Sbjct 54446 AGTCGCAGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCACGCAGA 54387 Query 1456032 AACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCT- 1456090 | |||||| ||||| ||||| |||||| || || | | || || ||| ||| Sbjct 54386 AGTCTACTCCCTCCTCATCGATACCTACATCCGCGAAACCGCACAGC--GAACACGTCTA 54329 Query 1456091 TTCGC-GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGG 1456149 ||| |||||||| ||| |||| | | | | ||||| || ||||| |||| ||| Sbjct 54328 TTCAATGCCATCGAGACGATGCCTGCCATCAAGCGCAAGGCTGAATGGGCAATGACTTGG 54269 Query 1456150 ATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCG 1456205 ||| ||||| || ||| ||||| ||| | | || | || ||||| || | Sbjct 54268 ATCTCAGACAAGCAG----TCGTG-CTTTGGTGAGAGATTGGTAGCATTCGCCGCTGTAG 54214 Query 1456206 AGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCA 1456265 |||||||||| ||||| || |||| ||||||||| |||||||||||||| || |||| Sbjct 54213 AGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGACTCA 54154 Query 1456266 TGCCCGGTCTT 1456276 |||| |||||| Sbjct 54153 TGCCTGGTCTT 54143 Score = 120 bits (132), Expect = 4e-21 Identities = 155/210 (74%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| || | |||||||||||||| || ||||| || ||| | || || || Sbjct 53957 ATCATCCTCCAAGCCGTCGAGATCGAAAAGGAGTTCCTCTCCGATGCCCTCCCCGTCCGC 53898 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 |||||||||||||||| || || |||||||||||||| | | ||||| || ||| | | Sbjct 53897 CTCATCGGCATGAACG-CAGAGCAGATGTGCCAGTACATCG-AGTTTGTAGCAGACAGAC 53840 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || | || || || | |||||||||||| |||| ||||| ||| | ||| Sbjct 53839 TACTAGTAGCACT-GGGTAATGAGAAGCACTACAACTCGGCGAACCCATTCGACTTCATG 53781 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAAC 1456732 ||| |||| ||||| | ||||||||||||| Sbjct 53780 GAGATGATTTCGCTGGCGGGCAAGACCAAC 53751 >seq35 Length=121122 Score = 167 bits (184), Expect = 3e-35 Identities = 340/495 (69%), Gaps = 25/495 (5%) Strand=Plus/Minus Query 1455795 AAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGA----CACGGT 1455850 || || ||||| ||||| |||||||| |||||| |||||||| || |||| Sbjct 14289 AAAGCAGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACCTCTCAAAGGATCTCCACG-- 14232 Query 1455851 CCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTT 1455907 |||||| | ||| | | | ||||| || |||||| ||||| ||||| || Sbjct 14231 --ACTGGGAGAACAAGCTCAACAAGGACGAACGTTTCTTCATCTCTCACGTACTCGCATT 14174 Query 1455908 TTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGG 1455967 || ||| || |||||| ||||| ||||||||| | || || | | || | Sbjct 14173 CTT-CGCTTCCGCCGATGGTATCGTCAACGAGAACCTCCTAGAGCGATTCAGCAGCGAAG 14115 Query 1455968 TCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACT 1456027 |||| | | ||||| | | || ||||| ||||||||| || |||||||||||| Sbjct 14114 TCCAGGTCGCCGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCACG 14055 Query 1456028 CTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACC 1456087 | ||| |||||| ||||| ||||| || ||| || || | | | ||| |||| || Sbjct 14054 CAGAAGTCTACTCCCTCCTCATCGATACATACATCCGCGAAACTGCCCAGA-GGAC-ACG 13997 Query 1456088 TCTTTCGC--GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAA 1456145 ||||| |||||||| ||| |||| | | | | ||||| || ||||| |||| Sbjct 13996 TCTTTTCAATGCCATCGAGACGATGCCAGCCATCAAGCGCAAGGCTGAATGGGCAATGAC 13937 Query 1456146 GTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC- 1456201 |||||| ||||| || ||| ||||| || || | || | || ||||| Sbjct 13936 ATGGATCTCAGACAAGCAG----TCGTG-CTTTGGTGAACGATTGGTAGCGTTCGCCGCT 13882 Query 1456202 GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGC 1456261 || ||||||||||| ||||| || |||| ||||||||| |||||||||||||| || Sbjct 13881 GTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGA 13822 Query 1456262 CTCATGCCCGGTCTT 1456276 |||||||| |||||| Sbjct 13821 CTCATGCCTGGTCTT 13807 Score = 93.3 bits (102), Expect = 6e-13 Identities = 144/200 (72%), Gaps = 7/200 (4%) Strand=Plus/Minus Query 1456535 GCCGTCGAGATCGAGAAAGAGTT--TGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGGCA 1456592 ||||||||||||||||| ||||| |||| ||| | || || || ||||| |||| Sbjct 13608 GCCGTCGAGATCGAGAAGGAGTTCCTGTC--CGACGCCCTTCCCGTCCGCCTCATTGGCA 13551 Query 1456593 TGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCGGC 1456652 ||||||| | || |||||||| ||||| || || || || || | || || | || Sbjct 13550 TGAACGC-AGAGCAGATGTGCCAATACATCGAGTTC-GTAGCAGATAGACTACTAGTAGC 13493 Query 1456653 GCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGATCT 1456712 || || || ||||||||||| | | | ||||| ||| | |||||| |||| | Sbjct 13492 ACTGGGTAACG-AGAAGCACTACGGTTCTACAAACCCATTCGACTTTATGGAGATGATTT 13434 Query 1456713 CGCTCGAGGGCAAGACCAAC 1456732 |||||| ||||||||| ||| Sbjct 13433 CGCTCGCGGGCAAGACAAAC 13414 >seq23 Length=274361 Score = 167 bits (184), Expect = 3e-35 Identities = 340/495 (69%), Gaps = 25/495 (5%) Strand=Plus/Minus Query 1455795 AAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGA----CACGGT 1455850 || || ||||| ||||| |||||||| |||||| |||||||| || |||| Sbjct 224120 AAAGCAGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACCTCTCAAAGGATCTCCACG-- 224063 Query 1455851 CCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTT 1455907 |||||| | ||| | | | ||||| || |||||| ||||| ||||| || Sbjct 224062 --ACTGGGAGAACAAGCTCAACAAGGACGAACGTTTCTTCATCTCTCACGTACTCGCATT 224005 Query 1455908 TTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGG 1455967 || ||| || |||||| ||||| ||||||||| | || || | | || | Sbjct 224004 CTT-CGCTTCCGCCGATGGTATCGTCAACGAGAACCTCCTAGAGCGATTCAGCAGCGAAG 223946 Query 1455968 TCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACT 1456027 |||| | | ||||| | | || ||||| ||||||||| || |||||||||||| Sbjct 223945 TCCAGGTCGCCGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCACG 223886 Query 1456028 CTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACC 1456087 | ||| |||||| ||||| ||||| || ||| || || | | | ||| |||| || Sbjct 223885 CAGAAGTCTACTCCCTCCTCATCGATACATACATCCGCGAAACTGCCCAGA-GGAC-ACG 223828 Query 1456088 TCTTTCGC--GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAA 1456145 ||||| |||||||| ||| |||| | | | | ||||| || ||||| |||| Sbjct 223827 TCTTTTCAATGCCATCGAGACGATGCCAGCCATCAAGCGCAAGGCTGAATGGGCAATGAC 223768 Query 1456146 GTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC- 1456201 |||||| ||||| || ||| ||||| || || | || | || ||||| Sbjct 223767 ATGGATCTCAGACAAGCAG----TCGTG-CTTTGGTGAACGATTGGTAGCGTTCGCCGCT 223713 Query 1456202 GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGC 1456261 || ||||||||||| ||||| || |||| ||||||||| |||||||||||||| || Sbjct 223712 GTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGA 223653 Query 1456262 CTCATGCCCGGTCTT 1456276 |||||||| |||||| Sbjct 223652 CTCATGCCTGGTCTT 223638 Score = 93.3 bits (102), Expect = 6e-13 Identities = 144/200 (72%), Gaps = 7/200 (4%) Strand=Plus/Minus Query 1456535 GCCGTCGAGATCGAGAAAGAGTT--TGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGGCA 1456592 ||||||||||||||||| ||||| |||| ||| | || || || ||||| |||| Sbjct 223439 GCCGTCGAGATCGAGAAGGAGTTCCTGTC--CGACGCCCTTCCCGTCCGCCTCATTGGCA 223382 Query 1456593 TGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCGGC 1456652 ||||||| | || |||||||| ||||| || || || || || | || || | || Sbjct 223381 TGAACGC-AGAGCAGATGTGCCAATACATCGAGTTC-GTAGCAGATAGACTACTAGTAGC 223324 Query 1456653 GCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGATCT 1456712 || || || ||||||||||| | | | ||||| ||| | |||||| |||| | Sbjct 223323 ACTGGGTAACG-AGAAGCACTACGGTTCTACAAACCCATTCGACTTTATGGAGATGATTT 223265 Query 1456713 CGCTCGAGGGCAAGACCAAC 1456732 |||||| ||||||||| ||| Sbjct 223264 CGCTCGCGGGCAAGACAAAC 223245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177796346416948