Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq12 89.7 4e-13 seq1 86.0 5e-12 >seq12 Length=1303331 Score = 89.7 bits (98), Expect = 4e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || ||||| || || ||||||||||||||||| | | | || |||| ||| Sbjct 511989 ACCAAGTGCAAGGTAGACTCCTTCTGAATATTGTAGTCGCTGAGGGTTCGGCCGTCCTCG 511930 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTG 27130 |||||||| |||||| | |||||||| ||||| Sbjct 511929 AGCTGTTTGCCGGCGAAGATGAGACGTTGTTG 511898 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||| || || || ||||||||||| | | | || | ||||| Sbjct 512501 ACCAAGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCTGAAAGGGTTCGTCCATCTTCC 512442 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||| || | ||||| | ||||||||| || || | ||| || ||||| | Sbjct 512441 AGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGTGGGATACCTTCCTTATCTTGG 512382 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | || | | || | || || | | || ||||| | ||| || | || Sbjct 512381 ATCTTGCTCTTGACAGCATCAATCGTATCGGACGACTCGACTTCCAAAGTAATGGTCTTT 512322 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || |||| || || ||||||||||||||| || || Sbjct 512321 CCTGTCAATGTCTTGACAAAGATTTGCATACCTCCT 512286 >seq1 Length=6229779 Score = 86.0 bits (94), Expect = 5e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | || | |||||| || || ||||| || || |||||||| |||||||| Sbjct 4306920 CCTCCTCGTAGACGGAGTACCAAGTGCAAGGTAGACTCCTTCTGAATATTATAGTCGCTG 4306861 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTG 27130 | | | || |||| ||||||||||| |||||| | ||||| || ||||| Sbjct 4306860 AGGGTTCGGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGTCGTTGTTG 4306811 Score = 86.0 bits (94), Expect = 5e-12 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| |||||||| || || | || | ||||||||||| || || | ||| || ||| Sbjct 4307360 TCTTCCAGCTGTTTTCCCGCAAAGATCAACCGCTGTTGATCAGGTGGAATACCTTCCTTA 4307301 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| | || | | || | ||||||| | || ||||||| || || Sbjct 4307300 TCTTGGATCTTGCTCTTGACAGCATCGATCGTGTCTGAAGACTCGACTTCTAATGTAATT 4307241 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 | ||||| |||| ||| || || |||||||||||| || || Sbjct 4307240 GTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCATACCTCCT 4307199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933602451248