Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq11 118 1e-21 seq1 114 2e-20 seq35 91.5 2e-13 seq23 91.5 2e-13 seq29 89.7 6e-13 seq4 84.2 3e-11 >seq11 Length=1302298 Score = 118 bits (130), Expect = 1e-21 Identities = 231/339 (68%), Gaps = 2/339 (1%) Strand=Plus/Minus Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 ||||||||||| |||||| |||| | || ||||| ||||| | | ||||||||| | | Sbjct 896400 GCATCCTTGTACAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCCTCGAGAATAGCATAC 896341 Query 111416 CAAACAT-CGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474 || | | | | | || | ||| | || || ||||| ||| ||||||||| | | Sbjct 896340 CAGAGTTTCTGGGCCTTG-ACAGTCTTCTTTGCGCGTCCTTCCTTCTCGTACTTCAAGAA 896282 Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534 || | || |||||||| || | ||| || |||||| | |||| ||||| Sbjct 896281 CAGCTCATCGAACTCCTCTCCGTAAACTTCGTGTAGGTTTGGTGCTTCAGCTGGGCAGAA 896222 Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 111594 || | ||| | |||| |||||| || || ||||||| | ||| || ||||| || | Sbjct 896221 GAGGGGCCAATCACCATTTTCCTCTACACGTCTCATGAACATGTCGGGGATCCAGAGAGC 896162 Query 111595 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 111654 | ||||| || | | || | ||||| | ||| ||||| || | || ||||| Sbjct 896161 GTAGAAGAGGTCGCGAGCGCGCACTTCTTCTTTACCGTGGTTCTTACGGAGGTCGAGGAA 896102 Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 111693 || | | |||||||||||||||||||| |||| ||| Sbjct 896101 TTCGAAAACATCCGCGTGCCATGGCTCAATGTAGATTGC 896063 >seq1 Length=6229779 Score = 114 bits (126), Expect = 2e-20 Identities = 230/336 (68%), Gaps = 4/336 (1%) Strand=Plus/Minus Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 ||||||||||| |||||| |||| | || ||||| ||||| | | |||||||| | | Sbjct 991764 GCATCCTTGTACAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATAGCATAC 991705 Query 111416 CAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474 || | | || | | || | ||| | || |||||||| ||| ||||||||| | | Sbjct 991704 CATAGCTTCTGAGCCTTG-ACAGTCTTCTTTGCCCGTCCTTCCTTCTCGTACTTCAAGAA 991646 Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534 ||| | || || ||||| || | | || || |||||| | | || ||||| Sbjct 991645 GAGCTCATCGAATTCCTCTCCGTACACTTCATGAAGGTTTGGTGCTTCAGCGGGGCAGAA 991586 Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 111594 | || ||| | ||| ||||| || || ||||||| | || |||||||| || | Sbjct 991585 CAAAGGCCAATCACCGTTCTCCTCTACTCGTCTCATGAACATATCGGGAATCCAGAGAGC 991526 Query 111595 TGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 111653 | || ||||| | | | | || | ||||| | ||| ||||| || || || |||| Sbjct 991525 GTAGAAAAGATCGCGTGCTCGGA-CTTCTTCTTTACCGTGGTTCTTGCGCAAGTCGAGGA 991467 Query 111654 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 111689 |||| | || |||||| ||||||||||||| |||| Sbjct 991466 ACTCGAAGACATCCGCATGCCATGGCTCAATGTAGA 991431 >seq35 Length=121122 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 122676 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735 ||||||||| ||| | || || || || ||||| ||||| |||||||| || ||||| Sbjct 13771 ACCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTT 13830 Query 122736 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 ||| | ||| | || ||| ||| || || ||||||||||| ||||| ||| || || Sbjct 13831 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 13890 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCA-AACCATTTCATTGCCCATT 122854 ||| | | ||||| | ||| | ||| ||| | | | |||| |||||||||||| Sbjct 13891 CGCTACCAATCGTTCACCAAAGCA-CGACTGCTTGTCTGAGATCCATGTCATTGCCCATT 13949 Query 122855 TCGCCTT 122861 ||||| Sbjct 13950 CAGCCTT 13956 >seq23 Length=274361 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 122676 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735 ||||||||| ||| | || || || || ||||| ||||| |||||||| || ||||| Sbjct 223602 ACCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTT 223661 Query 122736 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 ||| | ||| | || ||| ||| || || ||||||||||| ||||| ||| || || Sbjct 223662 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 223721 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCA-AACCATTTCATTGCCCATT 122854 ||| | | ||||| | ||| | ||| ||| | | | |||| |||||||||||| Sbjct 223722 CGCTACCAATCGTTCACCAAAGCA-CGACTGCTTGTCTGAGATCCATGTCATTGCCCATT 223780 Query 122855 TCGCCTT 122861 ||||| Sbjct 223781 CAGCCTT 223787 >seq29 Length=171343 Score = 89.7 bits (98), Expect = 6e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 122676 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735 ||||||||| ||| | || || ||||| |||||| ||||| |||||||| || ||||| Sbjct 54107 ACCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGTCCACGCTT 54166 Query 122736 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACA 122787 ||| | ||| | || ||| ||| || || ||||||||||| ||||| ||| Sbjct 54167 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACA 54218 >seq4 Length=2125370 Score = 84.2 bits (92), Expect = 3e-11 Identities = 280/427 (66%), Gaps = 13/427 (3%) Strand=Plus/Plus Query 11435 CCCACTTGGATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCC 11494 |||||| || || | || || ||||| || || || || || ||| || | ||| Sbjct 442352 CCCACTGCAATATTCCTGTCGAATCGACCAGGACGTAGCAGCGCACTATCTAGCACGTCC 442411 Query 11495 ACGCGATTAGTGGCCGCAATAACCACAA--TGCCAGTCTCATTGT--CAAAGCCATCCAT 11550 || ||||| || | |||| ||| || | ||| ||| |||| | || || ||||| Sbjct 442412 ACTCGATTTGTACCGGCAAGAACGACTACTTGC---TCTT-TTGTACCGAAACCGTCCAT 442467 Query 11551 CTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTG-GCAT--ACCACC 11607 |||| ||| | ||||| | || || | ||| |||||| | | || ||| || Sbjct 442468 CTCGACGAGGAGCTGATTGAGCGTGCTCTCCCGCTCGTCATTTCCACCGAATTGACCTCC 442527 Query 11608 AGCACTGCGTTGCTTGCCC-ACCGCATCAATCTCATCAATGAAGACAATACATGGTTGAT 11666 || | |||||| || | |||||||||||||| || |||| ||| | ||| || Sbjct 442528 CTTACCTC-TTGCTTTACCGATAGCATCAATCTCATCGATAAAGATGATAGAGGGTGCAT 442586 Query 11667 TTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCT 11726 | | ||| || | ||||||||||| || | | ||| ||||| |||||||||| Sbjct 442587 TCTTCTTTGCGGTTGCGAAGAGATCGCGGACTCGGGAAGAACCGACACCGACAAACATCT 442646 Query 11727 CCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTC 11786 | ||||| | || |||| | || ||| || || || ||| || || | ||| Sbjct 442647 CGACAAACTCTGAACCAGATACCGAGAGGAAAGGAACGCCTGCTTCTCCAGCTGTTGCTT 442706 Query 11787 GGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCT 11846 ||| || || || || ||||| ||||| || | || | ||| ||||| || |||| Sbjct 442707 TGGCAAGAAGTGTTTTACCCGTTCCTGGAGGCCCTGAGATGATGGCTCCTCGAGGAATCT 442766 Query 11847 TGGCACC 11853 | || || Sbjct 442767 TTGCGCC 442773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030791038400