Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 136 5e-27 seq11 129 7e-25 seq29 123 3e-23 seq35 120 4e-22 seq23 120 4e-22 seq4 84.2 3e-11 >seq1 Length=6229779 Score = 136 bits (150), Expect = 5e-27 Identities = 237/339 (70%), Gaps = 8/339 (2%) Strand=Plus/Plus Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675 |||| ||||||||||||| |||||| || | |||||||| || ||||| ||||| | Sbjct 991431 TCTACATTGAGCCATGGCATGCGGATGTCTTCGAGTTCCTCGACTTGCGCAAGAACCACG 991490 Query 104676 GTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 104735 || | || || | || |||||||| |||| ||||||||||||||| ||| | |||| Sbjct 991491 GTAAAGAAGAAGTCCGAGCACGCGATCTTTTCTACGCTCTCTGGATTCCCGATATGTTCA 991550 Query 104736 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTC 104795 ||| |||| ||||||| || ||||| || | || || || | | ||||| | Sbjct 991551 TGAGACGAGTAGAGGAGAACGGTGATTGGCCTTTGTTCTGCCCCGCTGAAGCACCAAACC 991610 Query 104796 TCTCCGATGCCGTG---GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAG 104852 | || ||| ||| || ||||| || || | || | | ||||||||| | |||| Sbjct 991611 T-TC--ATGAAGTGTACGGAGAGGAATTCGATGAGCTCTTCTTGAAGTACGAGAAGGAAG 991667 Query 104853 GTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAA 104911 | ||||| | ||| || | || | || | | ||| | |||||||| || |||| Sbjct 991668 GACGGGCAAAGAAGACTGT-CAAGGCTCAGAAGCTATGGTATGCTATTCTTGAGGCTCAG 991726 Query 104912 ACCGAGACTGGTACACCATACATGCTTTACAAAGACGCC 104950 || |||||||| | || | |||||| ||||| || ||| Sbjct 991727 ACTGAGACTGGAAACCCCTTCATGCTGTACAAGGATGCC 991765 >seq11 Length=1302298 Score = 129 bits (142), Expect = 7e-25 Identities = 234/340 (69%), Gaps = 2/340 (1%) Strand=Plus/Plus Query 104612 GCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAAC 104671 ||| |||| |||||||||||||||||||| | | || ||||| || | ||| ||| Sbjct 896063 GCAATCTACATTGAGCCATGGCACGCGGATGTTTTCGAATTCCTCGACCTCCGTAAGAAC 896122 Query 104672 CAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTC 104731 || ||| | || || | ||| ||||| ||||||| |||||||||||| || || | Sbjct 896123 CACGGTAAAGAAGAAGTGCGCGCTCGCGACCTCTTCTACGCTCTCTGGATCCCCGACATG 896182 Query 104732 TTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCT 104791 ||||||| | || ||||| | ||| ||||| | ||||| || |||| | ||||| Sbjct 896183 TTCATGAGACGTGTAGAGGAAAATGGTGATTGGCCCCTCTTCTGCCCAGCTGAAGCACCA 896242 Query 104792 GGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAA 104851 || ||| | || |||||||| || | || | | ||||||||| | ||| Sbjct 896243 AACCTACACGAAGTTTACGGAGAGGAGTTCGATGAGCTGTTCTTGAAGTACGAGAAGGAA 896302 Query 104852 GGTCGGGCGACTGCGACGGTGCCAGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCA 104910 || || || | ||| || | || | | | | ||| | ||||||||| || |||| Sbjct 896303 GGACGCGCAAAGAAGACTGT-CAAGGCCCAGAAACTCTGGTATGCTATTCTCGAGGCTCA 896361 Query 104911 AACCGAGACTGGTACACCATACATGCTTTACAAAGACGCC 104950 || |||||||| | || | |||||| ||||| || ||| Sbjct 896362 GACTGAGACTGGAAACCCCTTCATGCTGTACAAGGATGCC 896401 >seq29 Length=171343 Score = 123 bits (136), Expect = 3e-23 Identities = 142/188 (76%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 94753 AAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGTCGCGTTCCTTTGCTGAGCGA 94809 || || || ||||| |||| ||| | | | |||| ||||| | ||||| |||| || Sbjct 54292 AAGGCTGAATGGGCAATGACTTGGATCTCAGACAAGCAGTCGTG---CTTTGGTGAGAGA 54236 Query 94810 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 94869 | | ||||| || ||| ||||| ||||||||||||||||| ||| ||| || | Sbjct 54235 TTGGTAGCATTCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTC 54176 Query 94870 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 94929 |||||||||||||| || |||||||| ||||| ||||||||| ||||| |||| ||| Sbjct 54175 TGGCTCAAGAAGCGTGGACTCATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTGCCGT 54116 Query 94930 GACGAGGG 94937 || ||||| Sbjct 54115 GATGAGGG 54108 >seq35 Length=121122 Score = 120 bits (132), Expect = 4e-22 Identities = 141/188 (75%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 94753 AAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGTCGCGTTCCTTTGCTGAGCGA 94809 || || || ||||| |||| ||| | | | |||| ||||| | ||||| ||| ||| Sbjct 13956 AAGGCTGAATGGGCAATGACATGGATCTCAGACAAGCAGTCGTG---CTTTGGTGAACGA 13900 Query 94810 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 94869 | | || || || ||| ||||| ||||||||||||||||| ||| ||| || | Sbjct 13899 TTGGTAGCGTTCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTC 13840 Query 94870 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 94929 |||||||||||||| || |||||||| ||||| |||||||||||||| |||| ||| Sbjct 13839 TGGCTCAAGAAGCGTGGACTCATGCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGT 13780 Query 94930 GACGAGGG 94937 || ||||| Sbjct 13779 GATGAGGG 13772 >seq23 Length=274361 Score = 120 bits (132), Expect = 4e-22 Identities = 141/188 (75%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 94753 AAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGTCGCGTTCCTTTGCTGAGCGA 94809 || || || ||||| |||| ||| | | | |||| ||||| | ||||| ||| ||| Sbjct 223787 AAGGCTGAATGGGCAATGACATGGATCTCAGACAAGCAGTCGTG---CTTTGGTGAACGA 223731 Query 94810 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 94869 | | || || || ||| ||||| ||||||||||||||||| ||| ||| || | Sbjct 223730 TTGGTAGCGTTCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTC 223671 Query 94870 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 94929 |||||||||||||| || |||||||| ||||| |||||||||||||| |||| ||| Sbjct 223670 TGGCTCAAGAAGCGTGGACTCATGCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGT 223611 Query 94930 GACGAGGG 94937 || ||||| Sbjct 223610 GATGAGGG 223603 >seq4 Length=2125370 Score = 84.2 bits (92), Expect = 3e-11 Identities = 162/238 (68%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 9691 TTGCTTTCCC-ACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAG 9749 ||||||| || | |||||||||||||| || |||| ||| | ||| ||| | | Sbjct 442536 TTGCTTTACCGATAGCATCAATCTCATCGATAAAGATGATAGAGGGTGCATTCTTCTTTG 442595 Query 9750 CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9809 || | | |||||||| || || || | || ||||| ||||||||||| ||||| | Sbjct 442596 CGGTTGCGAAGAGATCGCGGACTCGGGAAGAACCGACACCGACAAACATCTCGACAAACT 442655 Query 9810 TTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9869 || | || || ||| || || | ||| || || | ||| ||| |||| Sbjct 442656 CTGAACCAGATACCGAGAGGAAAGGAACGCCTGCTTCTCCAGCTGTTGCTTTGGCAAGAA 442715 Query 9870 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 | || |||||||| ||||| || | || || ||| ||||| |||||||| ||||| Sbjct 442716 GTGTTTTACCCGTTCCTGGAGGCCCTGAGATGATGGCTCCTCGAGGAATCTTTGCGCC 442773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259677222960