Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq6 176 1e-38 seq15 174 5e-38 seq3 96.9 1e-14 seq2 93.3 1e-13 >seq6 Length=1874668 Score = 176 bits (194), Expect = 1e-38 Identities = 750/1175 (64%), Gaps = 15/1175 (1%) Strand=Plus/Plus Query 349478 GGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTT-ACCCGA 349536 ||||| || || | |||||||| || || || || || || || | ||| ||| || Sbjct 1319706 GGTGACAAGCCCGTCATTGAGGTCGAGTACAAGGGCGAG-AAGAAGACTTTCACACCTGA 1319764 Query 349537 AGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGA 349596 ||| || || || ||||| | | || ||| || | ||||| || | | |||| Sbjct 1319765 AGAGATCTCCTCCATGGTCCTCCTCAAGATGCGAGAGACCGCTGAGGCTTTCCTCGGTGG 1319824 Query 349597 AACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGC 349656 | || | | || || || ||||| || ||||| || ||||| | |||||| || Sbjct 1319825 AGACGTCAAGCAGGCCGTCATCACTGTCCCTGCCTACTTCAATGACTCGCAGCGTCAAGC 1319884 Query 349657 AACAAAAGATGCTGG-CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCA 349715 || || |||||||| ||| || || || | | ||||| | || || || || || | Sbjct 1319885 TACCAAGGATGCTGGTCAG-ATCGCCGGCATGCAGGTTCTCCGTATTATCAACGAGCCTA 1319943 Query 349716 CTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAG---aaaaaaaTATTC 349772 | || || || || || || || || || || | | | | | | | || || | | Sbjct 1319944 CCGCCGCTGCTATCGCTTACGGTCTCGACAAGAAGGGCGCCGCTGGCGAGAAGAACGTCC 1320003 Query 349773 TTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAA 349832 | || || ||| | |||||||||||||| |||||||| || || || | || ||||| | Sbjct 1320004 TCATCTTCGATCTCGGTGGTGGTACTTTCGATGTATCTCTCCTTACCATCGAGGAGGGTA 1320063 Query 349833 TTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATC 349892 | || ||||| || || || || ||||| || || | || ||||| || || || || Sbjct 1320064 TCTTCGAAGTCAAGGCTACCGCCGGTGACACCCACTTGGGAGGAGAGGACTTCGACAACA 1320123 Query 349893 GTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGAT 349951 | || || || || | | || || ||||| |||| || | ||| | | | Sbjct 1320124 GACTAGTCAACCACTTCACTCAGGAGTTCAAGCG-CAAGAACAAGAAGGATCTCGCCGGA 1320182 Query 349952 AATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCA 350011 || || | || | || || || |||| || || || || || ||||| | | || Sbjct 1320183 AACGCTCGTGCTCTCCGACGTCTGCGAACCGCATGCGAGCGAGCAAAGCGAACTCTTTCC 1320242 Query 350012 TCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCA 350071 || | | || ||| | || ||||| || ||||| || || | || |||| | Sbjct 1320243 TCCGCCGCTCAGACCACCATCGAAATCGACTCTCTCTACGAAGGTATCGACTTCTACACC 1320302 Query 350072 TCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGAT 350131 || || || |||||| | || || || | || |||||| || || | || ||||| Sbjct 1320303 TCCATCACCCGTGCTAGATTCGAGGAGCTCTGCCAGGATCTCTTCCGATCTACCATGGAC 1320362 Query 350132 CCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTT 350191 || || || || || | || | || || ||| | | | || | || Sbjct 1320363 CCAGTCGAGAAGGTTCTCCGCGACTCCAAGATCGACAAGTCTTCCGTACACGAGATCGTC 1320422 Query 350192 TTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAAT 350251 | || ||||| || || ||||| |||| |||||| || | | || || || || || Sbjct 1320423 CTCGTCGGTGGATCCACCCGTATCCCAAGAGTTCAGAAGCTCGTCTCCGACTTCTTCAAC 1320482 Query 350252 GGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTT 350311 ||||| || || | || || || || ||||| ||||| || || |||||||| ||| Sbjct 1320483 GGCAAGGAGCCAAACAAGTCCATCAACCCCGATGAGGCTGTCGCCTACGGTGCTGCCGTT 1320542 Query 350312 CAGGCATCTATTTTATCTGGAAATAAGAGTTC---TAAAATTGATGATCTATTACTACTA 350368 ||||| |||| | |||| | | | ||| || | | ||||| | || || Sbjct 1320543 CAGGCTGCTATCCTGACTGG---TGACACTTCCGAGAAGACCCAGGATCTCCTCCTTCTC 1320599 Query 350369 GATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATT 350428 ||||| |||| ||||| || || | || ||| | || | || | ||| ||| || Sbjct 1320600 GATGTCGCTCCTCTTTCCCTCGGTATCGAGACTGCCGGAGGTGTCTTCACTCCTCTCATC 1320659 Query 350429 CCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAAT 350488 ||||| | |||||||| || || |||||| | | || || || | ||||| || Sbjct 1320660 AAGAGAAACACCACTGTACCCACCAAGAAGTCCGAGATCTTCTCCACCTACGCAGACAAC 1320719 Query 350489 CAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAAT 350548 ||||||| ||| || || || || || || || ||||| || || || || || || Sbjct 1320720 CAGCCAGGTGTACTCATCCAGGTCTTCGAGGGAGAGCGTGCACGAACCAAGGACAACAAC 1320779 Query 350549 AAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATT 350608 || || |||| || || || || || ||| |||| || ||||| | Sbjct 1320780 CTCCTCGGGAAATTCGAGCTCTCTGGTATCCCTCCCGCTCCTCGAGGTGTACCTCAAGTC 1320839 Query 350609 GAAGTCTCTTTCGATATTGATTCAAATGGTAtttt 350643 || || | |||||| ||||| | || ||||| || Sbjct 1320840 GAGGTTACCTTCGATGTTGATGCTAACGGTATCTT 1320874 >seq15 Length=984733 Score = 174 bits (192), Expect = 5e-38 Identities = 762/1194 (64%), Gaps = 25/1194 (2%) Strand=Plus/Plus Query 349464 TTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAAC 349523 |||| || ||| ||||| || || ||||||| || || || || || || || || Sbjct 437322 TTGTCGCACAAGCTGGTGACAAGCCCGTTATTGAAGTCGAGTACAAGGGCGAG-AAGAAG 437380 Query 349524 AATTTTTACCC-GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAA 349582 | || ||| |||||||| ||||| ||||| | | || ||| || | ||||| Sbjct 437381 ACCTTCACCCCTGAAGAAATCTCATCCATGGTCCTCCTCAAGATGCGAGAGACCGCTGAG 437440 Query 349583 GCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGAT 349642 || | | |||| | || | | || || || ||||| || ||||| || || || Sbjct 437441 GCCTTCCTCGGTGGAGACGTCAAGCAGGCCGTCATCACTGTCCCTGCCTACTTCAACGAC 437500 Query 349643 GCCCAGCGTTCTGCAACAAAAGATGCTGG-CAGCATTGCGGGGTTAAATGTTCTAAGAAT 349701 | |||||| || || || |||||||| ||| || || || | | ||||| |||| Sbjct 437501 TCTCAGCGTCAAGCTACCAAGGATGCTGGTCAG-ATCGCCGGCATGCAGGTTCTCCGAAT 437559 Query 349702 GATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAG------TGA 349755 || || || || || || || || || || || || || || || | | | || Sbjct 437560 CATCAACGAGCCTACCGCCGCTGCTATCGCTTACGGTCTCGACAAGAAGGGCGCTTCTGG 437619 Query 349756 CCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACT 349815 | || || || | || || || ||| | |||||||||||||| ||||| || || || Sbjct 437620 C---GAGAAGAACGTCCTCATCTTCGATCTCGGTGGTGGTACTTTCGATGTCTCTCTCCT 437676 Query 349816 AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875 || | || ||||| || || ||||| || || || || ||||| || || | || || Sbjct 437677 TACCATCGAGGAGGGTATCTTCGAAGTCAAGGCTACCGCCGGTGACACCCACTTGGGAGG 437736 Query 349876 AGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTA 349934 ||| || || || || | || || || || | | || || || || |||| | Sbjct 437737 AGAGGACTTCGACAACAGACTAGTCAACCACTTCACTCAGGAGTTCAAACG-CAAGAACA 437795 Query 349935 AAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTG 349994 | | || ||| | ||| | | ||| | || || || |||| || || || || | Sbjct 437796 AGAAGGACCTTGCTGGCAATGCCCGTGCACTCCGACGTCTGCGAACCGCATGCGAGCGAG 437855 Query 349995 CTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATG 350054 | ||||| || | || || || | || ||| | || || ||||| ||||| || | Sbjct 437856 CAAAGCGAACCCTTTCCTCCGCTGCTCAGACCACCATCGAGATTGACTCTCTCTTCGAGG 437915 Query 350055 GCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTT 350114 | | || |||| | || || || ||||| | || ||||| | || ||| || | Sbjct 437916 GTATCGACTTCTACACCTCCATCACCCGTGCCAGATTCGAAGAGCTCTGCCAGGACCTCT 437975 Query 350115 TTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA-TGCAAAAATGTCCAAAAAT 350173 | ||| | || ||||| || || || || || | || | ||| | || | || | Sbjct 437976 TCAGATCTACCATGGACCCAGTCGAGAAGGTCCTCCGCGACTCCAAGATTGACAAATCCT 438035 Query 350174 CAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTA 350233 | | | | || | || | || ||||| || || ||||| |||| |||||| || | Sbjct 438036 CCG-TACACGAGATTGTCCTCGTCGGTGGATCCACCCGTATCCCAAGAGTTCAGAAGCTC 438094 Query 350234 CTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTT 350293 | || || || || || ||||| || || | ||| || || || || || ||||| Sbjct 438095 GTTTCCGACTTCTTCAACGGCAAGGAGCCAAACAAATCTATCAACCCCGACGAGGCTGTA 438154 Query 350294 GCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATA----AGAGTTCTAAAAT 350349 || || ||||| ||||||||||| |||| | | || ||| ||| || | Sbjct 438155 GCCTACGGTGCCGCTGTTCAGGCTGCTATCCTGACCGGTGATACCTCCGAG----AAGAC 438210 Query 350350 TGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGA 350409 | ||||| | || || || || |||| ||||| || ||| | || || | || | Sbjct 438211 CCAGGATCTCCTCCTTCTCGACGTCGCTCCTCTTTCCCTCGGAATTGAGACCGCCGGAGG 438270 Query 350410 AGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTT 350469 || | ||| || || |||| | || ||||| || || |||||| | | || Sbjct 438271 TGTCTTCACTCCCCTCATCAAGCGAAACACAACCGTACCAACCAAGAAGTCCGAGATCTT 438330 Query 350470 TTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGC 350529 || || | ||||| || ||||| | ||| || || || || || || |||||||| Sbjct 438331 CTCCACCTACGCAGACAACCAGCCGGGTGTACTCATCCAGGTCTTCGAGGGAGAACGTGC 438390 Query 350530 TCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCC 350589 || || || || || || || ||| | || || || || ||||| || Sbjct 438391 ACGAACCAAGGACAACAACCTTCTCGGAAAGTTCGAGCTCTCTGGTATCCCACCTGCTCC 438450 Query 350590 TAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTAtttt 350643 | | || ||||||||| | || ||| | ||||| | ||| | || ||||| || Sbjct 438451 TCGTGGTGTTCCTCAGGTCGAGGTCACCTTCGACGTCGATGCTAACGGTATCTT 438504 >seq3 Length=2186555 Score = 96.9 bits (106), Expect = 1e-14 Identities = 165/236 (70%), Gaps = 5/236 (2%) Strand=Plus/Plus Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309 || |||| |||||||| || || || ||||||||||| ||||| ||| |||| || Sbjct 1443993 CACCTTGTACAGCTGCTCCGTAAGCTACAGCTTCATCAGGGTTGATTCCTTGAGAAGGTT 1444052 Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369 |||||||||| || ||||| || | |||||| | ||| || || | ||||| || | Sbjct 1444053 CTTTGCCATTGAAGTATTCTTTGAGGAGTTGTTGGACTTTAGGGATACGTGTTGATCCTC 1444112 Query 183370 CGACTAATACTACTTCATCGATATTACTT--TTACTAATTTGTGAATCTTTTAAAACTTT 183427 |||| | ||| | ||||||| || ||| || | | | ||||| || |||| Sbjct 1444113 CGACAAGTACGATGTCATCGACAT--CTTCCTTCTTGACACCTCCGTCTTTCAAGACTTG 1444170 Query 183428 TTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTG 183483 ||||||||| | |||||| || | || | ||| || | |||||| || |||| Sbjct 1444171 TTCAACAGGCTTCATAGTCTTGCGGAAGAGATCCATGTTGAGCTCTTC-AAACTTG 1444225 Score = 93.3 bits (102), Expect = 1e-13 Identities = 178/260 (68%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 349655 GCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCC 349714 || ||||||||||| || | ||| || || | || ||||| |||| | || || ||| Sbjct 1444716 GCTACAAAAGATGCCGGTACCATCGCCGGTCTCAACGTTCTCCGAATCGTCAACGAGCCC 1444657 Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 || || || || || || || || || || |||| | | ||| | | || || | Sbjct 1444656 ACCGCAGCCGCCATCGCTTACGGTCT-GAACAAATCCGGCCCTGAGAGACAGATCATCGT 1444598 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | ||| | |||||||||||||||||||| || || || | |||| || || | Sbjct 1444597 GTAC--GATCTCGGTGGTGGTACTTTTGATGTCTCTCTGCTCTCGGTTGAGGAAGGTGTC 1444540 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGT 349894 || ||||| || || ||||| ||||| ||| | |||||||| ||||| |||||| | Sbjct 1444539 TTCGAAGTACTCGCTACGGCTGGAGATACCCATTTGGGTGGAGAGGATTTCGATAATAGA 1444480 Query 349895 CTCGTTTCGCATTTTGTTAA 349914 || || || ||||| || Sbjct 1444479 GTCATTGACCACTTTGTCAA 1444460 Score = 91.5 bits (100), Expect = 4e-13 Identities = 309/476 (65%), Gaps = 14/476 (3%) Strand=Plus/Minus Query 350076 TTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTG 350135 ||||||| || ||||||||| | |||||||| || | || ||| | |||| Sbjct 1444235 TTACACGCGCCAAGTTTGAAGAGCTCAACATGGATCTCTTCCGCAAGACTATGAAGCCTG 1444176 Query 350136 TGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATT--GATGAAGTAGTTTT 350193 | ||| |||| || ||||| | | |||| | || |||| ||||| | || | Sbjct 1444175 TTGAACAAGTCTTGAAAGACGGAGG--TGTCAAGAAGGAAGATGTCGATGACATCGTACT 1444118 Query 350194 AGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGG 350253 || || || || |||||||| || ||||| ||||| | || || | || ||||| Sbjct 1444117 TGTCGGAGGATCAACACGTATCCCTAAAGTCCAACAACTCCTCAAAGAATACTTCAATGG 1444058 Query 350254 CAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCA 350313 ||||||||||||| | ||| || || ||||||||||| || || || || ||||| || Sbjct 1444057 CAAAGAACCTTCTCAAGGAATCAACCCTGATGAAGCTGTAGCTTACGGAGCAGCTGTACA 1443998 Query 350314 GGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGT 350373 | ||| | |||||| | | || || | | ||| | | || | || || Sbjct 1443997 AGGTGGTATCCTTTCTGGAGA-AGAAGGACTGAGA-----GATATGGTCCTCATCGACGT 1443944 Query 350374 AACTCCACTTT--CGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCT 350431 || | |||| | || ||| | |||||| | || | |||||||| ||||| Sbjct 1443943 --CTGCCCTTTAACTCTCGGAATCGAAACTACAGGAGGTGTAATGACGAAACTTATCGGA 1443886 Query 350432 AGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAG 350491 ||||| |||||||| || ||| ||| | || || || || ||||| ||| Sbjct 1443885 AGAAACTCGGTGGTACCTACCAAGAAGAGCCAGATCTTCTCGACTGCCGCGGATAACCAG 1443826 Query 350492 CCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAA 350547 || | ||| || || ||||| || ||||| | ||| ||||| ||||| || Sbjct 1443825 CCTACAGTACTCATCCAGGTATTCGAGGGTGAGAGAGCTATGACTAAGGATAACAA 1443770 >seq2 Length=3751008 Score = 93.3 bits (102), Expect = 1e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 349776 TTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTT 349835 ||| |||||| || ||||||||||||||||| || || || | | || || || | | Sbjct 757264 TTTATGATTTGGGCGGTGGTACTTTTGATGTCTCGCTTCTGTCCGTCGAGGAAGGCGTGT 757323 Query 349836 TTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTC 349895 | |||||| || || ||||||||||| ||||| || ||||||||||| |||||| | Sbjct 757324 TCGAAGTTCTCGCTACGGCTGGTGATACCCATCTAGGAGGAGAAGATTTCGATAATAGAG 757383 Query 349896 TCGTTTCGCATTTTGTTAA 349914 || || || ||||| || Sbjct 757384 TCATTGATCACTTTGTCAA 757402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515251410213662