Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq12 105 8e-18 seq1 104 3e-17 >seq12 Length=1303331 Score = 105 bits (116), Expect = 8e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | || || ||||| |||||| | || || ||||| Sbjct 512293 ATGCAAATCTTTGTCAAGACATTGACAGGAAAGACCATTACTTTGGAAGTCGAGTCGTCC 512352 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| | | ||| || || || || ||||| || || || || || || Sbjct 512353 GATACGATTGATGCTGTCAAGAGCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCAA 512412 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| ||||| || || || |||| || ||||| ||||||| ||| Sbjct 512413 CAGAGACTCATCTTTGCGGGTAAACAGCTGGAAGATGGACGAACCCTTTCAGACTACAAT 512472 Query 27586 GTCCAAAAGGA 27596 |||| ||||| Sbjct 512473 ATCCAGAAGGA 512483 >seq1 Length=6229779 Score = 104 bits (114), Expect = 3e-17 Identities = 200/293 (68%), Gaps = 4/293 (1%) Strand=Plus/Minus Query 80715 CATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA 80774 |||||| | || || || ||||| || ||||| |||| ||||| || || ||| || Sbjct 992126 CATGAAAGCATCTGCAAGACCCTGCACACCGATACCGATAGGGCGATGACGGAAGTTGGA 992067 Query 80775 TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGT 80834 || |||||| | ||||| ||||| |||||| || ||||| ||| | || Sbjct 992066 GTTCTGAGCCTCCTTGACGGGGTAGAAGTTGACATCGATAACCTTGTTCAAGTTTCTTGC 992007 Query 80835 AACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCC--CCTTCACAAAT 80892 ||| || || || || || || ||||| |||| | | ||| |||| | ||| Sbjct 992006 AACTACTTTGGTGACGTCGTGCAGCTTCTGGAAGTTGTACAC--TCCATCCTTGATGAAT 991949 Query 80893 GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCG 80952 | ||||| | ||| |||| ||||||||||| ||||| |||| | | | ||||| Sbjct 991948 GTGGGAAGAGCGATGGAGGCCAAGTTGCACACGGCGACCTCGTCAGGAGCAGAGTACTCG 991889 Query 80953 ACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTT 81005 | ||| || |||||||| || || ||| || || || ||||| |||||||| Sbjct 991888 ATGATCTCAGTGCACAAGTTGGAGTTCTTGATCGTTCCAAGGTTCTTCTGGTT 991836 Score = 96.9 bits (106), Expect = 4e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 80037 CGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGA 80096 ||| || || |||||||| || |||||||| || |||||||| || || | ||||||||| Sbjct 992810 CGTTCGAAGGTAGTACATTCCAGTCTTGAGACCTTTCTTCCATCCATAGAAGTGCATAGA 992751 Query 80097 ACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156 | | || | || | ||||| | || | |||||| ||||| || || ||| ||| Sbjct 992750 AGTAAGTTGAGCGAAAGTGGGTGATTGCAAGTGGATGTTGAGAGATTGTGATTGATCGAT 992691 Query 80157 GAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216 ||| || || | || || | ||| ||||| || ||| || || ||||||||||| Sbjct 992690 GAAGGCTCCTCTGTCCGCTGACATGTCAATGATACTCTTCTGACTGATCTCCCATACTGT 992631 Query 80217 ACGATA 80222 ||||| Sbjct 992630 TCGATA 992625 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| |||||||| ||||| || || || ||||| ||||| Sbjct 4306921 AATGCAGATCTTCGTCAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTAGAGTCTTC 4306980 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 |||| |||| | ||| | || ||||||||||||||||| ||||| || || Sbjct 4306981 CGATACTATTGATGCCGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCTGA 4307037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309302152480