Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1 105 4e-18 seq12 98.7 6e-16 >seq1 Length=6229779 Score = 105 bits (116), Expect = 4e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | | ||||| ||||| ||||||||||| || ||||||||||| ||| Sbjct 4307432 CCTCCTCTGAGTCTGAGTACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAA 4307373 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | ||||| || ||||| || ||||| || || |||||||| || || || Sbjct 4307372 AGGGTTCTTCCATCTTCCAGCTGTTTTCCCGCAAAGATCAACCGCTGTTGATCAGGTGGA 4307313 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | || ||||| ||| |||||| Sbjct 4307312 ATACCTTCCTTATCTTGGATCTT 4307290 >seq12 Length=1303331 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | | |||||| || || ||||||||||| || || || || |||||| Sbjct 512519 CCTCCTCTGAGTCTGAGCACCAAGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCTGAA 512460 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | ||||| || |||||||| ||||| || | | |||||| || || || Sbjct 512459 AGGGTTCGTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGTGGG 512400 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||| ||| |||||| || | | ||| || || ||| ||| Sbjct 512399 ATACCTTCCTTATCTTGGATCTTGCTCTTGACAGCATCAATCGTATCGGACGACTCGACT 512340 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || || || || || || ||||| || ||||| Sbjct 512339 TCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAGATTTGCAT 512293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729009291882