Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 159 8e-34 seq12 123 6e-23 >seq1 Length=6229779 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || || | |||||| ||| || || |||| || ||||| | | ||||| Sbjct 4307423 AGTCTGAGTACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAAAGGGTTCTT 4307364 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| ||||| || || || ||||| | || ||||| || || |||||||||||| Sbjct 4307363 CCATCTTCCAGCTGTTTTCCCGCAAAGATCAACCGCTGTTGATCAGGTGGAATACCTTCC 4307304 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||||||||| ||| ||||| ||||| |||||||| | || || ||||| || Sbjct 4307303 TTATCTTGGATCTTGCTCTTGACAGCATCGATCGTGTCTGAAGACTCGACTTCTAATGTA 4307244 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| |||||||| || | ||| | |||||| Sbjct 4307243 ATTGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 4307206 >seq12 Length=1303331 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || || | ||| || ||| || || |||| |||||| || | | |||| Sbjct 512510 AGTCTGAGCACCAAGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCTGAAAGGGTTCGT 512451 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| ||||| || || || ||||| |||| ||||| || || || ||||||||| Sbjct 512450 CCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGTGGGATACCTTCC 512391 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||||||||| ||| ||||| || || || || || | || || || || || Sbjct 512390 TTATCTTGGATCTTGCTCTTGACAGCATCAATCGTATCGGACGACTCGACTTCCAAAGTA 512331 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| || ||||| || || | || | |||||| Sbjct 512330 ATGGTCTTTCCTGTCAATGTCTTGACAAAGATTTGCAT 512293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528846986876