Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq35 136 6e-27 seq23 136 6e-27 seq29 131 2e-25 >seq35 Length=121122 Score = 136 bits (150), Expect = 6e-27 Identities = 330/497 (66%), Gaps = 6/497 (1%) Strand=Plus/Plus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| || ||||| || |||||||| ||||||||||| |||||||| || || || ||| Sbjct 13793 TCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGCGGCG 13852 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791 ||||| ||||| ||||| ||||| |||||||| ||||| || || | || || || | Sbjct 13853 AAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAACGCTACCAATCGTTCACCAAAG 13912 Query 46792 CTGGCATCAT--TATGA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848 | | | | | ||| ||||| | ||||| |||||||| ||| | ||| Sbjct 13913 CACGACTGCTTGTCTGAGATCCATGTCATTGCCCATTCAGCCTTGCGCTTGATGGCTGGC 13972 Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908 || || || || ||||| || ||| | | | || | || | |||||||| Sbjct 13973 ATCGTCTCGATGGCATTGAAAAGACGTGTCCTCTGGGCAGTTTCGCGGATGTATGTATCG 14032 Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968 || | || || | ||||| || ||||||||||| ||||| || ||||| || Sbjct 14033 ATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTCAATCATGATCTGGAAGCCGTAGAAG 14092 Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACT 47028 || || || || | | ||| || || | | ||||| || | ||||| || || Sbjct 14093 CACCTGGCCTCGGCGACCTGGACTTCGCTGCTGAATCGCTCTAGGAGGTTCTCGTTGACG 14152 Query 47029 ATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTA 47088 || ||||| | ||| || ||||| | ||| || || || | ||| || | Sbjct 14153 ATACCATCGGCGGAAGCGAAGAATGCGAGTACGTGAGAGATGAAGAAACGTTCGTCCTTG 14212 Query 47089 GTCAGTTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAG 47145 | || || || |||||| | || ||| ||||| | || | || || || |||||| Sbjct 14213 TTGAGCTTGTTCTCCCAGTCGTGGAGATCCTTTGAGAGGTCGATCTCCTCTGCGGTCCAG 14272 Query 47146 AATGACGCCTCTGCTTT 47162 || || ||||||||||| Sbjct 14273 AAGGAAGCCTCTGCTTT 14289 >seq23 Length=274361 Score = 136 bits (150), Expect = 6e-27 Identities = 330/497 (66%), Gaps = 6/497 (1%) Strand=Plus/Plus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| || ||||| || |||||||| ||||||||||| |||||||| || || || ||| Sbjct 223624 TCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGCGGCG 223683 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791 ||||| ||||| ||||| ||||| |||||||| ||||| || || | || || || | Sbjct 223684 AAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAACGCTACCAATCGTTCACCAAAG 223743 Query 46792 CTGGCATCAT--TATGA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848 | | | | | ||| ||||| | ||||| |||||||| ||| | ||| Sbjct 223744 CACGACTGCTTGTCTGAGATCCATGTCATTGCCCATTCAGCCTTGCGCTTGATGGCTGGC 223803 Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908 || || || || ||||| || ||| | | | || | || | |||||||| Sbjct 223804 ATCGTCTCGATGGCATTGAAAAGACGTGTCCTCTGGGCAGTTTCGCGGATGTATGTATCG 223863 Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968 || | || || | ||||| || ||||||||||| ||||| || ||||| || Sbjct 223864 ATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTCAATCATGATCTGGAAGCCGTAGAAG 223923 Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACT 47028 || || || || | | ||| || || | | ||||| || | ||||| || || Sbjct 223924 CACCTGGCCTCGGCGACCTGGACTTCGCTGCTGAATCGCTCTAGGAGGTTCTCGTTGACG 223983 Query 47029 ATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTA 47088 || ||||| | ||| || ||||| | ||| || || || | ||| || | Sbjct 223984 ATACCATCGGCGGAAGCGAAGAATGCGAGTACGTGAGAGATGAAGAAACGTTCGTCCTTG 224043 Query 47089 GTCAGTTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAG 47145 | || || || |||||| | || ||| ||||| | || | || || || |||||| Sbjct 224044 TTGAGCTTGTTCTCCCAGTCGTGGAGATCCTTTGAGAGGTCGATCTCCTCTGCGGTCCAG 224103 Query 47146 AATGACGCCTCTGCTTT 47162 || || ||||||||||| Sbjct 224104 AAGGAAGCCTCTGCTTT 224120 >seq29 Length=171343 Score = 131 bits (144), Expect = 2e-25 Identities = 329/497 (66%), Gaps = 6/497 (1%) Strand=Plus/Plus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 || || || || || || |||||||| ||||||||||| |||||||| || || || ||| Sbjct 54129 TCATTGGAGAAGGTAAGACCAGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGCGGCG 54188 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791 ||||| ||||| ||||| ||||| |||||||| |||||||| || | |||||| || | Sbjct 54189 AAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAATGCTACCAATCTCTCACCAAAG 54248 Query 46792 CTGGCATCAT--TATGA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848 | | | | | ||| ||||| | ||||| |||||||| ||| | |||| Sbjct 54249 CACGACTGCTTGTCTGAGATCCAAGTCATTGCCCATTCAGCCTTGCGCTTGATGGCAGGC 54308 Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908 || || || || ||||| || ||| || | | | || | || ||||| Sbjct 54309 ATCGTCTCGATGGCATTGAATAGACGTGTTCGCTGTGCGGTTTCGCGGATGTAGGTATCG 54368 Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968 || | || || | ||||| || ||||||||||| ||||| || ||||| || Sbjct 54369 ATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTCAATCATGATCTGGAAGCCGTAGAAG 54428 Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACT 47028 || || || || | | || || || | | |||||||| | ||||| || || Sbjct 54429 CACCTGGCCTCTGCGACTTGGACTTCGCTGCTGAATCGTTCTAGGAGGTTCTCGTTGACG 54488 Query 47029 ATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTA 47088 || || || || || || ||||| | ||| || || || || ||| || | Sbjct 54489 ATACCGTCGGCAGAGGCGAAGAATGCGAGTACGTGAGAGATGAAGTAGCGTTCGTCCTTG 54548 Query 47089 GTCAGTTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAG 47145 | || || || |||||| | | || ||||| | || | || || || |||||| Sbjct 54549 TTGAGCTTGTTCTCCCAGTCGTGCAGGTCCTTTGAGAGGTCAATCTCCTCTGCGGTCCAG 54608 Query 47146 AATGACGCCTCTGCTTT 47162 || |||||||||||||| Sbjct 54609 AAGGACGCCTCTGCTTT 54625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933027601280