Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 165 2e-35 seq12 134 3e-26 seq20 91.5 3e-13 >seq1 Length=6229779 Score = 165 bits (182), Expect = 2e-35 Identities = 166/213 (78%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 ||||||| || | |||||| || || |||||||| || || | ||| || | ||||| Sbjct 4307417 AGTACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAAAGGGTTCTTCCATCT 4307358 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || || ||||| || ||||||||||| || ||||| ||| |||||||| ||||| ||| Sbjct 4307357 TCCAGCTGTTTTCCCGCAAAGATCAACCGCTGTTGATCAGGTGGAATACCTTCCTTATCT 4307298 Query 283008 TGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 |||||||| ||| || || | |||||| ||||| |||| |||||||| | || || || Sbjct 4307297 TGGATCTT-GCTCTTGACAGCATCGATCGTGTCTGAAGACTCGACTTCTAATGTAATTGT 4307239 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || ||||||||||| ||||| || ||||| Sbjct 4307238 CTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 4307206 Score = 111 bits (122), Expect = 3e-19 Identities = 401/619 (65%), Gaps = 14/619 (2%) Strand=Plus/Minus Query 273518 GAAACCTTTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTTCATCAG-TCGCTCCA 273576 ||| ||| ||||||| || | ||| | |||| || ||||| |||| | || | Sbjct 5371250 GAATCCTCTGTACCATGGGTGCATAGTCTCCATTGGCTCACCACGCATCTTCTTGCGA-A 5371192 Query 273577 CATTACCAATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAA 273636 |||| | || || ||| |||| ||||| |||| | | | | ||| || || || | Sbjct 5371191 GATTAGCGATGATGTCTGTAGGATTGTAGTTCGGGATGGCAGAACTCCATCCCGTACCGA 5371132 Query 273637 TACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAA 273696 ||||| || || ||||||| || | || | || || | || | | ||||||| Sbjct 5371131 TACCGTCTGATCCGTTCACCAAAACCATAGGTAGGATAGGCATGTACCAATTCGGCTCAA 5371072 Query 273697 TTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCT 273756 | | | |||||| |||| ||||| |||| | ||||||||| | || | | || || Sbjct 5371071 TGCTCTGACCATCATCGTTCAGGTAGGTCAAAATAGCATCATCT-TCTCTATGGAAGACT 5371013 Query 273757 -TTCGCGTCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCA 273815 ||| || || ||| ||||| || ||||| | | ||||| || |||||| Sbjct 5371012 GTTCTTGTGATGGGCGCCAGAGCAGTGAAGATATACCTAGGAGATGCATGATCTTTGCCA 5370953 Query 273816 CCTTGCAGCCTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCG 273875 ||||| || | | ||| || ||||| | || || || ||| | ||||||| | ||| Sbjct 5370952 CCTTGAAGTCGGGTACCGAATTGACCGTTCGGAAGGAGAAGGTTGAGGTTGTTGTTTCCG 5370893 Query 273876 ACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAG 273935 ||| | | ||| |||| | || ||||| || || || || |||||||| || Sbjct 5370892 ACGAACTGCTGTGCCAGACCGACAATAGTACCAGCGAGAGACTGTTCACCGTGGTGGTAT 5370833 Query 273936 GCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTT 273995 || ||||| || | || || || | ||| ||||| | ||| | | | ||| Sbjct 5370832 GCACTGTGCTCTCCAATGTATCCGACAAGCTGGAAGACCTTGATTTCGGCCTTGATGTTC 5370773 Query 273996 CGCTTGAA--TGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCG 274053 |||||| | || |||| || || ||||| ||||||||| ||||| ||||| | Sbjct 5370772 TTCTTGAAGCATCCGA--ACAAGACTTTGCGCTGACCGGGCTTGAAGCCATCGACGACGG 5370715 Query 274054 ATGGAATACTGCGTTCCAA---ATCATACCGAGAGAACAAAATCAGTTCCTTGTCAATGA 274110 | |||| || | ||| || | ||||| | ||| |||||||||| | || Sbjct 5370714 AAGGAA---TGGATCGCAAGTTGTCGGCCATCGAGAAAAGAATGAGTTCCTTGTTGACGA 5370658 Query 274111 AGTCAGGGACGGGAACCTC 274129 |||| ||| |||||||| Sbjct 5370657 AGTCGCGGATAGGAACCTC 5370639 Score = 96.9 bits (106), Expect = 7e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||||||||||||||| || ||||| | || |||| ||| ||||| || |||| || Sbjct 4307031 GGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGGCATCAATAGTATCGGAAGACTCT 4306972 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || ||||| ||||| ||||| || || | ||||| ||||| ||||||||| Sbjct 4306971 ACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGAAGATCTGCATT 4306921 >seq12 Length=1303331 Score = 134 bits (148), Expect = 3e-26 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || |||| || | |||||| || || ||||| |||||||| | ||| || || ||||| Sbjct 512504 AGCACCAAGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCTGAAAGGGTTCGTCCATCT 512445 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || || ||||| || |||||||| | | ||||| ||| || ||||| ||||| ||| Sbjct 512444 TCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGTGGGATACCTTCCTTATCT 512385 Query 283008 TGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 |||||| ||||| || || | ||| || || || || | |||||||| | ||| || || Sbjct 512384 TGGATC-TTGCTCTTGACAGCATCAATCGTATCGGACGACTCGACTTCCAAAGTAATGGT 512326 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || ||||| ||||| || || || ||||| Sbjct 512325 CTTTCCTGTCAATGTCTTGACAAAGATTTGCAT 512293 Score = 111 bits (122), Expect = 3e-19 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 || |||||||||||||| |||||||| | || |||| ||||||||| || |||| ||| Sbjct 512118 GGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGGCATCGATAGTATCAGAAGACTCG 512059 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || ||||| ||||||||||| || || | ||||| ||||| ||||||||| Sbjct 512058 ACCTCGAGGGTGATCGTCTTTCCGGTAAGGGTCTTTACGAAGATCTGCATT 512008 Score = 98.7 bits (108), Expect = 2e-15 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || || ||||| ||||| | |||| |||||| |||||||||||||| | Sbjct 512292 ACCTCCTCGAAGACGGAGTACGAGATGAAGCGTGGATTCTTTCTGGATGTTGTAGTCGGA 512233 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGG 282983 || ||||||||||| || | ||| || ||||| |||||||| || |||||| Sbjct 512232 GAGAGTGCGGCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGTTGG 512181 >seq20 Length=513148 Score = 91.5 bits (100), Expect = 3e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 43983 CCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGAC 44042 |||||| || || || ||| |||| ||||| || |||||| |||||||| | || | || Sbjct 349516 CCAAGCATCTACTTCTGAGCTGTATGGAAAAGTACAGGAGGTTCCTCAATCCGAGACAAC 349575 Query 44043 TCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAA 44102 || || || || || ||||||||||| || ||||| |||| | ||||| || Sbjct 349576 GCCTTTCTACCCGCGTTCACCATATGGTGTAGCAAAGCTTTATGGGTTCTGGATAGTCAA 349635 Query 44103 AAATTATCGCGAGTCGTATGGGATG 44127 |||||||| || |||||||| ||| Sbjct 349636 GAATTATCGAGAATCGTATGGCATG 349660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737134652716