Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 seq17 91.5 1e-13 seq7 89.7 5e-13 seq12 84.2 2e-11 >seq1 Length=6229779 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | |||| |||| || |||||||||||| ||||||||| | Sbjct 4306920 CCTCCTCGTAGACGGAGTACCAAGTGCAAGGTAGACTCCTTCTGAATATTATAGTCGCTG 4306861 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || |||| |||||||| ||||||||||| || || || |||||| Sbjct 4306860 AGGGTTCGGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGTCGTTGTTGG 4306810 Score = 89.7 bits (98), Expect = 5e-13 Identities = 81/101 (80%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 41656 CAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAG 41715 || |||||| || |||||||| ||||| |||||||||||||| || | || ||||| Sbjct 3067052 CACATGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCATCCTCGAG 3066993 Query 41716 CTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGGA 41755 ||||||||| ||||| || || |||||||| || |||||| Sbjct 3066992 CTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGCGGGA 3066952 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || ||||||||||||||||| |||||||| || || ||||| | | || || Sbjct 4307414 ACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAAAGGGTTCTTCCATCTTCC 4307355 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || || || || |||| |||||||| || | |||| | ||||| || | Sbjct 4307354 AGCTGTTTTCCCGCAAAGATCAACCGCTGTTGATCAGGTGGAATACCTTCCTTATCTTGG 4307295 Query 41774 ATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || || ||| || | || | ||||| ||||| || || | || || || | Sbjct 4307294 ATCTTGCTCTTGACAGCATCG--ATCGTGTCTGAAGACTCGACTTCTAATGTAATTGTCT 4307237 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| ||||| ||||| || ||||| Sbjct 4307236 TGCCAGTCAAAGTCTTGACGAAGATTTGCAT 4307206 >seq17 Length=645479 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | |||| |||| || ||||||||| ||||| ||||||||| Sbjct 176629 CCACCTCGTAGACGGAGTACCAAGTGCAAGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 176688 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 ||||| || | || |||||||| || || ||||| || || ||||||||||| Sbjct 176689 AGGGTTCGTCCATCCTCGAGCTGTTTACCAGCGAAGATGAGACGCTGTTGGTC 176741 >seq7 Length=1728130 Score = 89.7 bits (98), Expect = 5e-13 Identities = 81/101 (80%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 41656 CAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAG 41715 || |||||| || ||||||||| ||||| ||||| |||||||| || | || ||||| Sbjct 1697611 CACATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTCCGTCCATCCTCGAG 1697670 Query 41716 CTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGGA 41755 ||||||||| ||||| || || |||||||| || |||||| Sbjct 1697671 CTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGCGGGA 1697711 >seq12 Length=1303331 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | |||||| | |||| |||| || |||||||||||| || |||||| | Sbjct 512007 CCTCCTCTTAGACGAAGGACCAAGTGCAAGGTAGACTCCTTCTGAATATTGTAGTCGCTG 511948 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || |||| |||||||| ||||||||||| || || || |||||| Sbjct 511947 AGGGTTCGGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGACGTTGTTGG 511897 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| |||||| || ||||| ||||| ||||||||| Sbjct 512291 CCTCCTCGAAGACGGAGTACGAGATGAAGCGTGGATTCTTTCTGGATGTTGTAGTCGGAG 512232 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 || ||||| | || || | ||||| |||||||| |||| ||||||||| Sbjct 512231 AGAGTGCGGCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGTTGG 512181 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||||||||||||||||| || || ||||| || ||||| || | || || Sbjct 512502 CACCAAGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCTGAAAGGGTTCGTCCATCTTC 512443 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||| || || || || || || | |||||| || | || | | ||||| || Sbjct 512442 CAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGTGGGATACCTTCCTTATCTTG 512383 Query 41773 GATTTTTTGCTTCAACGACGACA-CA---GTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 ||| || ||| ||| || || || ||| |||||| || |||| || || | Sbjct 512382 GATCTTGCTCTT----GACAGCATCAATCGTATCGGACGACTCGACTTCCAAAGTAATGG 512327 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || |||| ||||| || || || ||||| Sbjct 512326 TCTTTCCTGTCAATGTCTTGACAAAGATTTGCAT 512293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303110064800