Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6 253 2e-62 seq5 89.7 5e-13 seq8 87.8 2e-12 seq2 87.8 2e-12 >seq6 Length=1963780 Score = 253 bits (280), Expect = 2e-62 Identities = 375/525 (71%), Gaps = 6/525 (1%) Strand=Plus/Minus Query 116649 ACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGA 116708 ||| |||| | ||||| || |||||||||| |||||| | ||||| ||||||||| Sbjct 1099177 ACAGAAAG-CAGAGGCTTCCTTCTGGACCGCAGAGGAGATTGACCTTTCCAAGGACCTCC 1099119 Query 116709 GCGACTGGGAGCGCTTGAACGACAACGA-GCGCCATT--TCATCAAGCACGTGCTGGCCT 116765 |||||||||| | | | |||| || | | ||| ||||| ||||| || || | Sbjct 1099118 ACGACTGGGAGAACAAGCTCAACAAGGACGAACGATTCTTCATCTCTCACGTACTCGCAT 1099059 Query 116766 TTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAG-GAG 116824 | ||||| || |||||| |||||||||||||| || | ||||| ||| ||| || Sbjct 1099058 TCTTCGCTTCCGCCGACGGTATCGTCAACGAGAACCTTCTAGAGCGATTCAG-CAGCGAA 1099000 Query 116825 GTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCAC 116884 || ||||| ||||| || |||||||||||||||| |||||| || || ||| | ||| Sbjct 1098999 GTCCAGGTCGCCGAAGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATTCAC 1098940 Query 116885 TCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGT 116944 | ||| | || || ||||||||| || ||| | ||| | | || ||| Sbjct 1098939 GCAGAAGTCTACTCCCTCCTCATCGATACCTACATCCGCGAAACCGCACAGCGAACACGT 1098880 Query 116945 TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGC 117004 | || |||||||||||||| ||||| |||| |||||||| ||||| || Sbjct 1098879 CTATTCAACGCCATCGAGACCATGCCAGCTATCAAGCGCAAGGCCGAATGGGCAATGACA 1098820 Query 117005 TGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAG 117064 |||||| | | || || | |||||| ||| | |||| |||||||| || || ||| Sbjct 1098819 TGGATCTCAGACAAGCAGTCGTGCTTCGGAGAGAGATTGGTAGCCTTCGCCGCTGTAGAG 1098760 Query 117065 GGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATG 117124 ||| ||||||| || || ||||||||||| || ||||||||||| || || |||||| Sbjct 1098759 GGCATCTTCTTCTCTGGTTCCTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGTCTCATG 1098700 Query 117125 CCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || || || || ||| ||| |||||||||| | | || |||||| Sbjct 1098699 CCTGGTCTTACCTTCTCCAATGAGCTCATCTGCCGTGATGAGGGT 1098655 >seq5 Length=2034464 Score = 89.7 bits (98), Expect = 5e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 ||||||| | ||||| || || ||||||| ||| ||||||||||| || || | || | Sbjct 467863 GCATCCCACCCGACCAACAGCGTCTCATCTTCGCTGGCAAACAGCTCGAGGATGGACGAA 467804 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAG 40881 ||||| |||||||||||||||||||||| Sbjct 467803 CCCTCTCCGACTACAACATCCAGAAGGAG 467775 >seq8 Length=1378256 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 ||||||| | || ||||| || ||||||| ||| ||||| ||||| || || | || | Sbjct 34060 GCATCCCGCCCGATCAGCAGCGTCTCATCTTCGCAGGCAAGCAGCTCGAGGATGGACGAA 34001 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 |||| |||||||||||||||||||||| | || |||||| Sbjct 34000 CCCTATCCGACTACAACATCCAGAAGGAGTCGACTCTGCAT 33960 >seq2 Length=3262383 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | ||||| || |||||||| | || ||||| | || Sbjct 1222414 ATGCAGATCTTCGTTAAGACGTTGACGGGAAAGACCATCACTCTGGAAGTCGAGTCGTCC 1222473 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || || | || || || || ||||| | || || Sbjct 1222474 GACACGATTGATGCTGTTAAGAGCAAGATCCAAGATAAGGAAGGTATCCCGCCTGATCAA 1222533 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||||| ||||| ||||||||||| || | | || ||| || ||||| Sbjct 1222534 CAGAGACTCATCTTTGCGGGTAAACAGCTGGAAGATGGAAGAACTCTCTCAGATTACAAT 1222593 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||||| || Sbjct 1222594 ATCCAGAAGGAGAGCACGCTCCA 1222616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219129157360