Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7 168 6e-37 seq6 109 5e-19 >seq7 Length=1769091 Score = 168 bits (186), Expect = 6e-37 Identities = 296/429 (69%), Gaps = 14/429 (3%) Strand=Plus/Minus Query 23144 TCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCAC 23203 |||||||| |||||| | || | || ||||| ||| | ||| | ||| || ||| Sbjct 964318 TCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCAGTCTGAGCCTCAAGGATAGCATACCAG 964259 Query 23204 ATAGTCTGAGCGTGAACA-----CGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGT 23258 | ||||||| | ||| | | |||||| ||||| | ||||||||| | Sbjct 964258 AGCTTCTGAGCCTTGACAGTCTTCTTTGCACGT-----CCTTCCTTCTCGTACTTCAAGA 964204 Query 23259 ACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATT--GCATCGGACA 23316 | | | | || ||||| | ||||| ||||| ||| ||| | || ||| || || Sbjct 964203 AGAGCTCATCGAATTCATCTCCGTACACCTCGGCGAGGTTGGGTGCTTCGGCA--GGGCA 964146 Query 23317 CATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376 | |||| ||| || | || || |||||||| || | ||| || ||||| || Sbjct 964145 GAAGAGAGGCCAGTCACCGTTCTCCTCTACTCGTCTCATGAACATATCGGGGATCCAGAG 964086 Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436 ||||||||| || ||||| ||||| || || ||||| ||| |||||| | || | Sbjct 964085 AGCGTAGAAGAGATCGCGAGCGCGGACTTCTTCTTTACCGTGGTTCTTGCGGAGGTCGAG 964026 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 || || || || || || ||||| ||||| | ||| | |||||| || || |||| ||| Sbjct 964025 GAACTCGAAAACATCTGCGTGCCATGGCTCAATGTAGATGGCAAAGGCACCAGGTCGCTT 963966 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 ||||| || ||||||||||| || || ||||| ||||| |||| ||||| ||||||| Sbjct 963965 GTTGCCTCCTTGATCGACGTATCGAGCGGTGTTATTGTAGACTCGGAGCATGGGCACGAT 963906 Query 23557 ACCGTTGGA 23565 |||||| || Sbjct 963905 ACCGTTTGA 963897 >seq6 Length=1963780 Score = 109 bits (120), Expect = 5e-19 Identities = 352/535 (66%), Gaps = 26/535 (5%) Strand=Plus/Minus Query 57583 ACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGA 57642 ||| |||| |||| || || || ||||||| || || | ||||| || ||||| || Sbjct 1099177 ACAGAAAG-CAGAGGCTTCCTTCTGGACCGCAGAGGAGATTGACCTTTCCAAGGACCTCC 1099119 Query 57643 GCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGT 57699 ||| ||||| | ||||| | || || || || ||||| | || | Sbjct 1099118 ACGACTGGGAGAACAAGCTCAACAAGGACGAACGATTCTTCATCTCTCACGTACTCGCAT 1099059 Query 57700 TTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAG--A 57757 | ||||| | |||| ||||| || |||||||| | | || |||| || || | Sbjct 1099058 TCTTCGCTTCCGCCGACGGTATCGTCAACGAGAACCTTCTAGAGCGATT--CAGCAGCGA 1099001 Query 57758 AGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCA 57817 ||| || || | || || || ||||| ||||| || || | ||||||||| | || Sbjct 1099000 AGTCCAGGTCGCCGAAGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATTCA 1098941 Query 57818 TTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG-AC-GAGAA-ACG 57874 ||||| | || || || ||||||||||| ||| | || | || || | ||| ||| Sbjct 1098940 CGCAGAAGTCTACTCCCTCCTCATCGATACCTACATCCGCGAAACCGCACAGCGAACACG 1098881 Query 57875 TAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTC 57931 | || |||||||| ||||| || ||||| || || |||| ||||| || ||| | Sbjct 1098880 T---CTATTCAACGCCATCGAGACCATGCCAGCTAT---CAAGCGCAAGGCCGAATGGGC 1098827 Query 57932 AATCAAATGGATAAAAAGCGCCACGGCCACG---TTCGCCGAGAGGCTAATCGCGTTCGC 57988 ||| | |||||| | | || | || |||| ||||| | | || ||||| Sbjct 1098826 AATGACATGGATCTCA---GACAAGCAGTCGTGCTTCGGAGAGAGATTGGTAGCCTTCGC 1098770 Query 57989 CGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACG 58048 ||| || || || || ||||| || || ||| || || || || ||| | ||||| || Sbjct 1098769 CGCTGTAGAGGGCATCTTCTTCTCTGGTTCCTTCGCCGCCATCTTCTGGCTCAAGAAGCG 1098710 Query 58049 CGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103 || || ||||| || || || || ||| ||| | || | || || |||||| Sbjct 1098709 TGGTCTCATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTGCCGTGATGAGGGT 1098655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766338707120