Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 4e-13 >seq2 Length=3262383 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 ||||| | ||||| | ||||| |||| ||||||||||| || | ||||||||| || Sbjct 1222640 CCTCCTCTTAGTCTGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAATCTGAG 1222581 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | | || |||| ||||| || ||||| || | || ||||||||| | ||| Sbjct 1222580 AGAGTTCTTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGCGGG 1222521 Query 43003 ACACCTTCTTTTTCGCTGATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||| || || |||| ||| || || ||| |||||| | |||||| Sbjct 1222520 ATACCTTCCTTATCTTGGATCTTGCTC-TTAACAGCATCAATCGTGTCGGACGACTCGAC 1222462 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || ||||| || | || || || || || ||||| Sbjct 1222461 TTCCAGAGTGATGGTCTTTCCCGTCAACGTCTTAACGAAGATCTGCAT 1222414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369548872638