Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6 168 1e-36 >seq6 Length=1963780 Score = 168 bits (186), Expect = 1e-36 Identities = 332/482 (69%), Gaps = 8/482 (2%) Strand=Plus/Minus Query 125044 AGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGA 125103 |||| ||||| ||||| | || ||| | || || ||||||||||| |||| ||||||| Sbjct 1099166 AGGCTTCCTTCTGGACCGCAGAGGAGATTGACCTTTCCAAGGACCTCCACGACTGGGAGA 1099107 Query 125104 -CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGC 125162 | | | || || || ||| || || || ||| | | || ||||| || | Sbjct 1099106 ACAAGCTCAACAAGGAC-GAACGATTCTTCATCTCTCACGTACTCGCATTCTTCGCTTCC 1099048 Query 125163 TCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCAT-TC- 125220 |||| || ||||||||||| || || | |||||| || | | ||| || Sbjct 1099047 GCCGACGGTATCGTCAACGAGAACCTTCTAGAGCGATTCAGC--AGCGAAGTCCAGGTCG 1098990 Query 125221 CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGT 125280 | || | |||||| ||||| ||||| ||||||||||| ||| | ||| | ||| | | Sbjct 1098989 CCGAAGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATTCACGCAGAAGTCT 1098930 Query 125281 ACTCTACACTGATTGACATGTACATTCGCGAT-CCGCAACGTAAACACATGCTCTTTAAC 125339 |||| || || || | ||||| ||||| ||||| | ||||| | || || ||| Sbjct 1098929 ACTCCCTCCTCATCGATACCTACATCCGCGAAACCGCACAGCGAACACGT-CTATTCAAC 1098871 Query 125340 GCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGAT 125399 || ||||| || |||| |||| ||||| |||||| || |||||| Sbjct 1098870 GCCATCGAGACCATGCCAGCTATCAAGCGCAAGGCCGAATGGGCAATGACATGGATCTCA 1098811 Query 125400 GACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTC 125459 ||| | |||| | | || || ||| |||| || |||||||| ||||||||||||||| Sbjct 1098810 GACAAGCAGTCGTGCTTCGGAGAGAGATTGGTAGCCTTCGCCGCTGTAGAGGGCATCTTC 1098751 Query 125460 TTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTG 125519 || || ||| || || |||||||| |||||||||||||| || |||||||| || || Sbjct 1098750 TTCTCTGGTTCCTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTT 1098691 Query 125520 AC 125521 || Sbjct 1098690 AC 1098689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059098104360