Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2 111 4e-19 >seq2 Length=3262383 Score = 111 bits (122), Expect = 4e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || |||||||| || || || | || | || || ||||| ||||| || || || Sbjct 1222640 CCTCCTCTTAGTCTGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAATCTGAG 1222581 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 |||||||| || ||||| || ||||| || ||||| || || |||||||||||||| || Sbjct 1222580 AGAGTTCTTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGCGGG 1222521 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||| ||||| || ||| ||||| || ||| || | || ||| | || || Sbjct 1222520 ATACCTTCCTTATCTTGGATC-TTGCTCTTAACAGCATCAATCGTGTCGGACGACTCGAC 1222462 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||| || || | || || || || |||||||| Sbjct 1222461 TTCCAGAGTGATGGTCTTTCCCGTCAACGTCTTAACGAAGATCTGCAT 1222414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398237724788