Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-21 >seq2 Length=3262383 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| | ||||| |||||||| Sbjct 1222414 ATGCAGATCTTCGTTAAGACGTTGACGGGAAAGACCATCACTCTGGAAGTCGAGTCGTCC 1222473 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | | ||| || ||| || || ||||| || || ||||| ||| Sbjct 1222474 GACACGATTGATGCTGTTAAGAGCAAGATCCAAGATAAGGAAGGTATCCCGCCTGATCAA 1222533 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || ||||| || ||||| | ||||||| | ||| | ||||||||| Sbjct 1222534 CAGAGACTCATCTTTGCGGGTAAACAGCTGGAAGATGGAAGAACTCTCTCAGATTACAAT 1222593 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || |||||| || || || || || ||||||||||| Sbjct 1222594 ATCCAGAAGGAGAGCACGCTCCACTTGGTCCTCAGACTAAGAGGAGG 1222640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327941906965