Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 125 1e-23 seq7 95.1 2e-14 >seq2 Length=3262383 Score = 125 bits (138), Expect = 1e-23 Identities = 349/533 (65%), Gaps = 8/533 (2%) Strand=Plus/Plus Query 218507 TCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTC----GCGGTATGATGTG 218562 ||||| ||| ||||||||| ||||||| || ||||| ||||| |||| || || || Sbjct 2355902 TCCCCATCCGGGACTTCATCAACAAGGAACTAATTCTGTTCTCAATGGCGG-ATAATTTG 2355960 Query 218563 GAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTT 218622 || || ||||| || || ||||| |||| || ||||||||| ||||||| Sbjct 2355961 ---CGATCCATTCCTTCGGTTGTCGATGGTTTCAAACCTGGTCAGCGTAAGGTCCTCTTC 2356017 Query 218623 GCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTA 218682 | |||||| |||| | ||| || |||||| ||| || || ||| | Sbjct 2356018 GGATGCTTCAAGAAGAACATCAAAGCAGAGATCAAGGTCTTCCAGCTTGTCGGATATATC 2356077 Query 218683 TCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATG 218742 ||| || || ||||| || || || ||| ||| | || || || || Sbjct 2356078 GGTGAACACAGTGCATATCATCATGGAGAACAATCTCTCGCTGGTACTATCGTCGGTCTG 2356137 Query 218743 GCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802 || ||| | | ||| |||| ||| || ||||| | ||||||||||||||||| || ||| Sbjct 2356138 GCGCAGCAGTTTGTTGGCAATAATAATCTGAACCTTCTGCTCCCCAACGGTCAATTCGGT 2356197 Query 218803 TCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCG 218862 ||||||| ||||| || ||| ||| || |||||||||||||||| | || | Sbjct 2356198 ACTCGTCTCCAAGGTGGTAAAGATCATGCCTCGCCCAGGTATATCTTTACTGCGCTGGCT 2356257 Query 218863 CCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGAC 218922 || | || | || ||||| | | ||||||| || | | || || | || Sbjct 2356258 CCGATCACAAGAACCGTCTTCAACAAAGAGGATGATGCTATCTTGACCTACCTGAACGAT 2356317 Query 218923 GATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAAT 218982 || || || || || | ||||| ||||| ||| || | ||||||| ||| Sbjct 2356318 GACGGACAAAGCATCGAACCGAACTGGTACATGCCTATTATGCCTATGGTGCTCGTCAAT 2356377 Query 218983 GGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCC 219035 || | |||||||||| || || | ||| ||| ||||| |||||| || Sbjct 2356378 GGATCAGATGGTATCGGTACCGGTTGGAGTTCTGCTATTCCGAATTACAACCC 2356430 >seq7 Length=1769091 Score = 95.1 bits (104), Expect = 2e-14 Identities = 122/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 ||||| || ||||| || ||||| || || ||||| | || || |||||| || | Sbjct 438168 GGACCAAACGGTGCTGGAAAGTCGACACTTGTCAAACTTCTCGTAGGAGAGACCGAGCCT 438227 Query 280239 A-CTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGC 280297 || ||| | || |||||||| |||||| || || | |||||||| |||||||| Sbjct 438228 GGCTCAGGAGAA-GTCTGGAAGCACCCCAACTTGGTCATCGGATACGTCGCCCAGCACGC 438286 Query 280298 TTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATAC 280343 ||||||||||||||| |||| || |||| ||| ||| | ||||| Sbjct 438287 TTTCCACCACATCGATCACCATCTCGACAAGACCCCTCTCGAATAC 438332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836655139251