Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq6 122 2e-22 seq5 98.7 2e-15 seq2 91.5 3e-13 >seq6 Length=1963780 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 9980 GTTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAA 10039 ||| | |||||| |||| ||||| | |||||||||||| || || ||| ||| || | Sbjct 1098299 GTTTGTCTTGCCGGCGAGCGAAATCATCTCCATGAAGTCGAAAGGATTCGCGGAACCGTA 1098358 Query 10040 CTGCTTGGGGTAACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCT 10099 ||||| || ||| |||||| | | | ||| || ||||||||||||||||||| Sbjct 1098359 GTGCTTCTCGTTACCCAGTGCTACTAGTAGTCTGTCTGCTACGAACTCGATGTACTGGCA 1098418 Query 10100 CATCAGGTCCGAGTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTT 10159 |||| | || | ||||||||| || | |||| ||||| ||||||| | | ||| ||||| Sbjct 1098419 CATCTGCTCTGCGTTCATGCCGATGAGGCGGACGGGGAGGGCGTCGGAGAGGAACTCCTT 1098478 Query 10160 TTCGTTGGCGACCGCTT 10176 || | |||| |||| Sbjct 1098479 CTCAATCTCGACAGCTT 1098495 >seq5 Length=2034464 Score = 98.7 bits (108), Expect = 2e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||||||||| || ||||| || |||||||| || |||||| Sbjct 467740 CCACCTCGCAGACGGAGTACCAAGTGTAAGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 467799 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||| || || ||||| ||||| | |||||||||||||| Sbjct 467800 AGGGTTCGTCCATCCTCGAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGGTCGGGTGGG 467859 Query 68355 ATGC 68358 |||| Sbjct 467860 ATGC 467863 >seq2 Length=3262383 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| || | ||| | || || ||||| ||||| |||||||| || |||||| Sbjct 1222412 CCTCCTCGAAGACGAAGTACGAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 1222353 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTG 68344 ||||| | |||||||| || ||||| |||||||| || | || ||||| Sbjct 1222352 AGTGTACGGCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGTTG 1222303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622273276920