Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq6 199 7e-46 seq7 98.7 2e-15 >seq6 Length=1963780 Score = 199 bits (220), Expect = 7e-46 Identities = 353/506 (70%), Gaps = 13/506 (3%) Strand=Plus/Minus Query 42335 CTGGACCGCCGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGT-CACTGTCTG 42393 ||||||||| |||||||||||||| |||||||| || ||||||| || || Sbjct 1099156 CTGGACCGCAGAGGAGATTGACCTTTCCAAGGACCTCCACGACTGGGAGAACAAGCTCAA 1099097 Query 42394 --AGAACGAAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCAT 42451 || ||||| || ||| || || |||| || |||||||| || | ||||| || Sbjct 1099096 CAAGGACGAACGATTCTTCATCTCTCACGTACTCGCATTCTTCGCTTCCGCCGACGGTAT 1099037 Query 42452 AGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTG 42511 ||||| |||||||| | |||| | || || ||| | || || | || Sbjct 1099036 CGTCAACGAGAACCTTCTAGAGCGATTCAGCAGCGAAGTCCAGGTCGCCGAAGCCAGGTG 1098977 Query 42512 CTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCT 42571 |||||||||||||||||| || || ||| | ||| | || || ||| || || | Sbjct 1098976 CTTCTACGGCTTCCAGATCATGATTGAAAACATTCACGCAGAAGTCTACTCCCTCCTCAT 1098917 Query 42572 CAACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGAT 42631 | | || ||||||| || ||| |||| | | || ||||| ||||| ||||| || Sbjct 1098916 CGATACCTACATCCGCGAAACCGCACAGCGAACACGTCTATTCAACGCCATCGAGACCAT 1098857 Query 42632 GCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAA- 42690 ||| |||||| ||||| || ||||| | | |||||| || | | ||| Sbjct 1098856 GCCAGCTATCAAGCGCAAGGCCGAATGGGCAATGACATGGATCTC-AGAC---AAGCAGT 1098801 Query 42691 CGT---TCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCG 42747 ||| |||| ||||| |||||||||| |||| || ||||||||||||||||| || Sbjct 1098800 CGTGCTTCGGAGAGAGATTGGTAGCCTTCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTT 1098741 Query 42748 CCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCG 42806 |||||||| ||||||||||||||||| || ||| || ||||| || || |||||||| Sbjct 1098740 CCTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGCCTGGTCTTACCTTCTCC 1098682 Query 42807 AACGAACTCATCAGCAGGGACGAGGG 42832 || || |||||| || | || ||||| Sbjct 1098681 AATGAGCTCATCTGCCGTGATGAGGG 1098656 >seq7 Length=1769091 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCG-CGGGCCTTGCC 244449 ||||| ||||||| |||||||||||||||||| |||||||| |||| || || | Sbjct 964766 TCGAGAGCGGCGTGGTAGATGGTCTCGAAGATGTCCTTGTTCA-GTCGTCGAGCGTCAGG 964708 Query 244450 GCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCC 244509 || | ||| || |||| | ||||||| | || || || || ||||| ||||| || Sbjct 964707 GCTGTCGAAAGGCATGCGAAGGGCCATGAAGGCATCTGCGAGACCTTGCACACCGATTCC 964648 Query 244510 GATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 || || | || || ||| ||| | || || ||||||||||||||| |||| Sbjct 964647 AATAGGGCGATGACGGAAGTTCGAGTTCTGAGCCTCCTTGACGGGGTAAAAGTTGACGTC 964588 Query 244570 GATCACCTTGTTGAGGTT 244587 ||| |||||||| | ||| Sbjct 964587 GATGACCTTGTTCAAGTT 964570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339070153360