Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq6 113 6e-20 seq7 102 1e-16 >seq6 Length=1963780 Score = 113 bits (124), Expect = 6e-20 Identities = 158/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 127537 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 127596 |||||| |||||| ||||||| ||||| |||||| ||||| ||||||||||| ||||| Sbjct 1098655 ACCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGACCACGCTT 1098714 Query 127597 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 127656 ||| | |||||| || || || || |||||||||||||| ||||| ||| ||||| Sbjct 1098715 CTTGAGCCAGAAGATGGCGGCGAAGGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 1098774 Query 127657 CGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGTATCA-AACCACTTCATCGCCCA 127713 || | | | ||| | | ||| |||| |||| | | | ||| |||| ||||| Sbjct 1098775 GGCTACCAATCTCTCTCC---GAAGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCA 1098831 Query 127714 CTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 | ||||| || |||| ||| | ||||| ||| || Sbjct 1098832 TTCGGCCTTGCGCTTGATAGCTGGCATGGTCTCGATGGC 1098870 >seq7 Length=1769091 Score = 102 bits (112), Expect = 1e-16 Identities = 226/334 (68%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 || |||||||| ||||| | || | || ||||| || || | || || ||||| | | Sbjct 964321 GCGTCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCAGTCTGAGCCTCAAGGATAGCATAC 964262 Query 116611 CATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669 || | | || | | || | ||||| || || || || |||| ||||||||| | | Sbjct 964261 CAGAGCTTCTGAGCCTTG-ACAGTCTTCTTTGCACGTCCTTCCTTCTCGTACTTCAAGAA 964203 Query 116670 GAGGGCCTCAAACTCTTCACCC-ACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728 ||| | || || || || || ||| |||| | ||| ||||| | | || |||| Sbjct 964202 GAGCTCATCGAATTCATCTCCGTACA-CCTCGGCGAGGTTGGGTGCTTCGGCAGGGCAGA 964144 Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788 |||||| ||| | ||| |||||| || || ||||||| | || ||||||||||| | Sbjct 964143 AGAGAGGCCAGTCACCGTTCTCCTCTACTCGTCTCATGAACATATCGGGGATCCAGAGAG 964084 Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848 | |||||||||| ||| ||| ||||||| | || || || || | || | | Sbjct 964083 CGTAGAAGAGATCGCGAGCGCGGACTTCTTCTTTACCGTGGTTCTTGCGGAGGTCGAGGA 964024 Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 116882 | || | | ||| |||||||| || || | ||| Sbjct 964023 ACTCGAAAACATCTGCGTGCCATGGCTCAATGTA 963990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507115642760