Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2 104 3e-17 seq8 86.0 7e-12 >seq2 Length=3262383 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||||| | | |||| || | || |||||||| ||||||||||| || || Sbjct 1222640 CCTCCTCTTAGTCTGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAATCTGAG 1222581 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | | || || ||||| || || || || || | | ||| || || | ||| Sbjct 1222580 AGAGTTCTTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGCGGG 1222521 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||||| || |||||| |||| | | | | ||||||| ||| || || Sbjct 1222520 ATACCTTCCTTATCTTGGATCTTGCTCTTAACAGCATCAATCGTGTCGGACGACTCGACT 1222461 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| || ||||||| ||| ||||| ||||| ||||| Sbjct 1222460 TCCAGAGTGATGGTCTTTCCCGTCAACGTCTTAACGAAGATCTGCAT 1222414 >seq8 Length=1378256 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||||||| || || | || |||||||||||||| ||||| Sbjct 33972 CTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGTCCATCCTCGAGCTGCTTGCCTGCGAA 34031 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCT 46491 || | |||||||| |||| ||| | ||| Sbjct 34032 GATGAGACGCTGCTGATCGGGCGGGATGCT 34061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238322279720