Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6 224 1e-53 seq5 95.1 1e-14 seq2 95.1 1e-14 >seq6 Length=1963780 Score = 224 bits (248), Expect = 1e-53 Identities = 364/519 (70%), Gaps = 5/519 (1%) Strand=Plus/Plus Query 132916 CCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTT 132975 ||||| || | | | ||||| || ||| ||| || | || |||||||| || || || Sbjct 1098656 CCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGACCACGCTTC 1098715 Query 132976 TTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAA 133035 |||||||| || ||||||||||| || || ||||||| |||||| || || ||||| Sbjct 1098716 TTGAGCCAGAAGATGGCGGCGAAGGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAG 1098775 Query 133036 GCCACCAGGCGCTCGCCGAA-CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTC 133094 || |||| | ||| ||||| | | || ||| ||| |||||| || |||||||| Sbjct 1098776 GCTACCAATCTCTCTCCGAAGCACGACTGCTTGTCTGA-GATCCATGTCATTGCCCATTC 1098834 Query 133095 GGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTC 133154 |||||| |||| ||||| || ||||||||||| || | ||| | || | | Sbjct 1098835 GGCCTTGCGCTTGATAGCTGGCATGGTCTCGATGGCGTTGAATAGACGTGTTCGCTGTGC 1098894 Query 133155 CGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCAT 133214 | || | |||||| ||||||||| || || | ||| | ||| | ||| || || Sbjct 1098895 GGTTTCGCGGATGTAGGTATCGATGAGGAGGGAGTAGACTTCTGCGTGAATGTTTTCAAT 1098954 Query 133215 GGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACG 133274 ||| || |||||||| ||||||| || ||| | ||||| ||||| ||| || Sbjct 1098955 CATGATCTGGAAGCCGTAGAAGCACCTGGCTTCGGCGACCTGGACTTCGCTGCTGAATCG 1099014 Query 133275 CTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTT 133334 ||| | || || ||||||||||| |||||| || ||||| || || || ||||| Sbjct 1099015 CTCTAGAAGGTTCTCGTTGACGATACCGTCGGCGGAAGCGAAGAATGCGAGTACGTGAGA 1099074 Query 133335 GATGA--AATGGCGC-TCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAG 133391 ||||| ||| | | || |||| | | | |||||||||| | ||||||||| || Sbjct 1099075 GATGAAGAATCGTTCGTCCTTGTTGAGCTTGTTCTCCCAGTCGTGGAGGTCCTTGGAAAG 1099134 Query 133392 GTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTT 133430 ||| | |||||| ||||||| || || ||||| ||||| Sbjct 1099135 GTCAATCTCCTCTGCGGTCCAGAAGGAAGCCTCTGCTTT 1099173 >seq5 Length=2034464 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415 ||||||||||||| ||||| | ||| ||||||||||| || || | || |||||| || Sbjct 467854 CCGACCAACAGCGTCTCATCTTCGCTGGCAAACAGCTCGAGGATGGACGAACCCTCTCCG 467795 Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| ||||| | || | || ||||| || ||| || |||| || Sbjct 467794 ACTACAACATCCAGAAGGAGTCTACCTTACACTTGGTACTCCGTCTGCGAGGTGG 467740 >seq2 Length=3262383 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/217 (72%), Gaps = 10/217 (5%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | ||||| || |||||||| | || |||||| | || Sbjct 1222414 ATGCAGATCTTCGTTAAGACGTTGACGGGAAAGACCATCACTCTGGAAGTCGAGTCGTCC 1222473 Query 38304 GACA-GCGTGCAAACGCT-TAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359 |||| | || | ||| | |||| || |||| || || || || || |||||| || Sbjct 1222474 GACACGATTG---ATGCTGTTAAGAGCAAGATCCAAGATAAGGAAGGTAT-CCCGCCTGA 1222529 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 |||||| | ||||| | ||||| ||||||||||| || | | || ||| || || Sbjct 1222530 TCAACAGAGACTCATCTTTGCGGGTAAACAGCTGGAAGATGGAAGAACTCTCTCAGATTA 1222589 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCT 38455 ||| ||||| ||||| ||| ||||| || ||||| || Sbjct 1222590 CAATATCCAGAAGGAGAGC-ACGCTCCACTTGGTCCT 1222625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172731226240