Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 338 8e-88 seq2 156 5e-33 >seq1 Length=4947887 Score = 338 bits (374), Expect = 8e-88 Identities = 557/803 (69%), Gaps = 3/803 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | |||||| || ||||| | || ||||| || || |||||||||||||| Sbjct 4393462 TCACCGGTAAGGATGGCAGCCTGGACGGCGGCACCGTAGGCTACGGCCTCATCGGGGTTG 4393403 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | ||| || | || || ||||| || | || || | | | |||| | | ||| Sbjct 4393402 ATAGATTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAGACGAGCTTCTGAACTCTGGGG 4393343 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || ||||||||||| | || || || | || || || |||||||| ||| Sbjct 4393342 ATACGGGTGGATCCACCGACAAGGACAATCTCGTGTACGGAAGACTTGTCGATCTTGGAG 4393283 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| | ||| | ||| ||||| ||| Sbjct 4393282 TCGCGGAGGACCTTCTCGACTGGGTCCATGGTGGATCTGAAGAGATCCTGGCACAGCTCC 4393223 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || | ||||| || ||||| || || || || | ||| ||||| | || ||||| Sbjct 4393222 TCGAATCTAGCACGAGTGATGGAGGTGTAAAAGTCGATGCCCTCGTAAAGAGAGTCAATC 4393163 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | || || | ||||||||||| ||||| || || || || Sbjct 4393162 TCGATGGTGGTCTGGGCGGCGGAGGAAAGGGTTCGCTTTGCTCGCTCGCATGCAGTGCGG 4393103 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | ||| | |||||||| | ||| |||| | ||| ||||| | || || || ||||| Sbjct 4393102 AGACGTCTGAGGGCACGAGCGTTTCCGGCGAGATCCTTCTTGTTCTTTCGCTTGAACTCC 4393043 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | || |||||| | ||||| |||||||| || || |||||||| || || || Sbjct 4393042 TGAGTGAAGTGGTTGACTAGTCTGTTGTCGAAATCCTCTCCTCCCAAGTGGGTGTCACCA 4392983 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | || || | | | || ||||| || ||| Sbjct 4392982 GCGGTAGCCTTGACCTCGAAGATACCCTCCTCGATAGTGAGGAGAGATACATCGAATGTA 4392923 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC---GTCTTTGTTCTTATCGAGA 7606 |||||||| || || || ||||| |||||| | ||| | | ||||| |||||| Sbjct 4392922 CCACCACCGAGATCGAAGATGAGAACGTTCTTCTCGCCAGAAGCGCCCTTCTTGTCGAGA 4392863 Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCA 7666 ||||| |||||||| || || || || || || || ||||| ||| | || ||| || Sbjct 4392862 CCGTAAGCGATAGCAGCGGCGGTAGGCTCGTTGATGATACGGAGAACCTGCATGCCGGCG 4392803 Query 7667 ATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTT 7726 || | ||||| || || ||||| || || || ||||| |||||||| ||||| || Sbjct 4392802 ATCTGACCAGCATCCTTGGTAGCTTGACGCTGGGAGTCGTTGAAGTAGGCAGGGACAGTG 4392743 Query 7727 ACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTA 7786 | ||| || | | |||| | |||||| | | || ||| | ||| |||| ||| Sbjct 4392742 ATGACGGCCTGCTTGACATCTCCACCGAGGAAAGCCTCTGCGGTCTCTCTCATCTTGAGG 4392683 Query 7787 AGAACCATCGATGAAATCTCTTC 7809 || ||||| ||||| |||||||| Sbjct 4392682 AGGACCATGGATGAGATCTCTTC 4392660 >seq2 Length=3262383 Score = 156 bits (172), Expect = 5e-33 Identities = 304/443 (69%), Gaps = 17/443 (4%) Strand=Plus/Minus Query 7331 GAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGG 7390 ||||| | ||||||||||| ||||| || || | || | |||||| || ||||| | Sbjct 1668957 GAAGAGAGAGTTCGCTTTGCACGCTCGCATGCTGATCTCAGACGACGCAGAGCACGGGCA 1668898 Query 7391 TTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGG 7447 | ||| ||||| | ||| || || | || ||||| | |||||| |||| ||| Sbjct 1668897 TCACCTTCGATATCCTGCTTGTGCTTCCTCTTGAACTCAGCCTTGAAGTGCTCGAGCAGG 1668838 Query 7448 AGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCA 7507 | | | ||||| || || || |||||||| || || || ||||| || ||||| | Sbjct 1668837 -GCGTTG--TCGAAGTCCTCTCCTCCCAAGTGAGTGTCACCAGCGGTAGCCTTGACGGCG 1668781 Query 7508 AAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAA 7567 |||| |||||| ||| | | | || ||||| || ||||||||||| || || ||| Sbjct 1668780 AAGACACCTCCAGTGATGGTAAGAAGGGAGACATCGAAAGTACCACCACCGAGATCGAAA 1668721 Query 7568 ATGAGTACG---------TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATA 7618 ||||| ||| ||| | || | ||| ||| |||||||||||| ||||| Sbjct 1668720 ATGAGAACGGTGCGCTCCTTCTTGTCCTTGTCGTTGGCGGCATCGAGACCGTAAGCGATG 1668661 Query 7619 GCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGC 7677 || || || || || || || || |||| || |||| | ||| ||||| || || | || Sbjct 1668660 GCGGCGGCGGTAGGCTCGTTGATGATACGGAGGACA-TCCAGACCAGCGATGGTACCGGC 1668602 Query 7678 ATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTC 7737 ||| || || | | || || || ||||| |||||||| || || || || || || | Sbjct 1668601 ATCCTTGGTGGAAAGACGCTGGGAGTCGTTGAAGTAGGCAGGTACGGTGACAACGGCCTT 1668542 Query 7738 CGTGACTTTCTTACCGAGATACG 7760 | | || |||| |||| |||| Sbjct 1668541 CTTAACGGTCTTGCCGATCTACG 1668519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132712669240