Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 123 3e-23 seq6 89.7 6e-13 >seq3 Length=2343223 Score = 123 bits (136), Expect = 3e-23 Identities = 277/409 (68%), Gaps = 13/409 (3%) Strand=Plus/Plus Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565 ||||| ||||| || || || ||||| | ||| || | ||| || || || || | || Sbjct 749705 TCGAATCGACCAGGTCGCAGCAGAGCGTTATCCAGTACATCTACTCGATTCGTGCCTGCC 749764 Query 11566 ATGACTACAATGCCAGTCTCATTGT--CGAAACCGTCCATTTCTGTGAGAAGCTGGTTGA 11623 | || || | | || | | || |||| |||||||| || || ||||| |||| Sbjct 749765 AGAACGACGA--CTTGTTCCTTCGTGCCGAATCCGTCCATCTCGACTAGCAGCTGATTGA 749822 Query 11624 TCGTCTGTTCACGCTCATCGTTGGA---GGGCATACCACCT--GCCGAACGCTTCTTACC 11678 ||| || ||||| ||||| | | || ||| ||| |||| |||| Sbjct 749823 GCGTACTCTCTCGCTCGTCGTTCCCTCCGAACTGGCCGCCTTTGCCTCTTGCTT--TACC 749880 Query 11679 GACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAA 11738 || |||||| |||||||||||||| | |||| | ||| ||| |||| |||| Sbjct 749881 GATAGCGTCGATCTCATCGATGAAGATGATAGAAGGTGCGTTCTTCTTTGCCGTAGCGAA 749940 Query 11739 AAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA 11798 || ||||| || || | || ||||| ||||||||||| ||||| | || |||| Sbjct 749941 TAGATCACGAACTCGGGAAGAACCGACACCAACGAACATCTCGACGAACTCTGACCCAGA 750000 Query 11799 -ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTAC 11857 ||| || |||||||||| | ||||||||| | ||| || || || || |||| Sbjct 750001 TACA-GAAAGGAAGGGAACACCCGCCTCACCAGCTGTAGCTTTTGCAAGTAGGGTTTTAC 750059 Query 11858 CCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906 | || ||||| | ||||| || | ||||||||| ||||||||||| || Sbjct 750060 CGGTTCCAGGAGGACCAGAGATGATGGCGCCACGAGGGATCTTGGCTCC 750108 >seq6 Length=1963780 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| || ||||||||||||| |||| ||| ||||||||||| || | ||| Sbjct 1098656 CCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGACCACGCTTC 1098715 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| |||||||| || ||||| |||||||||||||| ||| |||||| Sbjct 1098716 TTGAGCCAGAAGATGGCGGCGAAGGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAG 1098775 Query 119634 GC 119635 || Sbjct 1098776 GC 1098777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975919015800