Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq7 111 2e-19 seq6 102 1e-16 >seq7 Length=1769091 Score = 111 bits (122), Expect = 2e-19 Identities = 227/335 (68%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 || |||||||| |||||| |||| | || ||||| ||||| | || || || || | | Sbjct 964321 GCGTCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCAGTCTGAGCCTCAAGGATAGCATAC 964262 Query 106643 CACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 106701 || | | || | | || | ||| | || || ||||| ||| ||||||||| | | Sbjct 964261 CAGAGCTTCTGAGCCTTG-ACAGTCTTCTTTGCACGTCCTTCCTTCTCGTACTTCAAGAA 964203 Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761 ||| | || || || || || | | |||| ||| ||||| | | | || ||||| Sbjct 964202 GAGCTCATCGAATTCATCTCCGTACACCTCGGCGAGGTTGGGTGCTTCGGCAGGGCAGAA 964143 Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821 |||| ||| | ||| |||||| || || ||||||| | || || ||||| || | Sbjct 964142 GAGAGGCCAGTCACCGTTCTCCTCTACTCGTCTCATGAACATATCGGGGATCCAGAGAGC 964083 Query 106822 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 106881 | |||||||| | | || | ||||| | ||| ||||| || | || ||||| Sbjct 964082 GTAGAAGAGATCGCGAGCGCGGACTTCTTCTTTACCGTGGTTCTTGCGGAGGTCGAGGAA 964023 Query 106882 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 106916 ||| | | ||| |||||||||||||||| |||| Sbjct 964022 CTCGAAAACATCTGCGTGCCATGGCTCAATGTAGA 963988 >seq6 Length=1963780 Score = 102 bits (112), Expect = 1e-16 Identities = 159/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 117291 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTT 117350 ||||||||| ||| | || || ||||| |||||| || || ||||||||||| ||||| Sbjct 1098655 ACCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGACCACGCTT 1098714 Query 117351 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 117410 ||| | ||| | || ||| ||| || || ||||||||||| ||||| ||| || || Sbjct 1098715 CTTGAGCCAGAAGATGGCGGCGAAGGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 1098774 Query 117411 CGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATTTCATTGCCCATT 117469 || | | | ||| ||||| | ||| |||| | | | |||| |||||||||||| Sbjct 1098775 GGCTACCAATCTCTCTCCGAAGCA-CGACTGCTTGTCTGAGATCCATGTCATTGCCCATT 1098833 Query 117470 TCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATA 117514 ||||| || ||| ||| | || | |||||| | |||| Sbjct 1098834 CGGCCTTGCGCTTGATAGCTGGCATGGTCTCGATGGCGTTGAATA 1098878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980718877640