Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2 131 4e-25 >seq2 Length=3262383 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | || | ||| || ||| ||| || || ||||||||||| | ||||| Sbjct 1222635 TCTTAGTCTGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAATCTGAGAGAGT 1222576 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| ||||| ||||| || ||||| |||| ||||| || || || || || Sbjct 1222575 TCTTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGCGGGATACC 1222516 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || ||||| || || ||| || ||||| ||||| || || ||||| || Sbjct 1222515 TTCCTTATCTTGGATCTTGCTCTTAACAGCATCAATCGTGTCGGACGACTCGACTTCCAG 1222456 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | |||||||| ||||| || || ||||| | ||||| Sbjct 1222455 AGTGATGGTCTTTCCCGTCAACGTCTTAACGAAGATCTGCAT 1222414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481443632437